Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM2Q9C040 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TRIM2Q9C040 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM2Q9C040 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM2Q9C040 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM2Q9C040 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM2Q9C040 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM2Q9C040 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM2Q9C040 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.17■□□□□ 0.02
TRIM2Q9C040 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
TRIM2Q9C040 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM2Q9C040 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM2Q9C040 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM2Q9C040 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM2Q9C040 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM2Q9C040 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM2Q9C040 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM2Q9C040 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM2Q9C040 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.17■□□□□ 0.02
TRIM2Q9C040 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM2Q9C040 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.17■□□□□ 0.02
TRIM2Q9C040 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM2Q9C040 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM2Q9C040 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM2Q9C040 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
TRIM2Q9C040 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.17■□□□□ 0.02
TRIM2Q9C040 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM2Q9C040 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TRIM2Q9C040 POLD2P1-201ENST00000511220 997 ntBASIC15.17■□□□□ 0.02
TRIM2Q9C040 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.17■□□□□ 0.02
TRIM2Q9C040 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TRIM2Q9C040 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.17■□□□□ 0.02
TRIM2Q9C040 AL645728.2-201ENST00000641974 660 ntBASIC15.17■□□□□ 0.02
TRIM2Q9C040 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM2Q9C040 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM2Q9C040 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRIM2Q9C040 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM2Q9C040 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM2Q9C040 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM2Q9C040 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.17■□□□□ 0.02
TRIM2Q9C040 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM2Q9C040 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.17■□□□□ 0.02
TRIM2Q9C040 AC104109.2-201ENST00000602919 1418 ntBASIC15.17■□□□□ 0.02
TRIM2Q9C040 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM2Q9C040 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM2Q9C040 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM2Q9C040 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM2Q9C040 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM2Q9C040 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.16■□□□□ 0.02
TRIM2Q9C040 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM2Q9C040 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.16■□□□□ 0.02
TRIM2Q9C040 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM2Q9C040 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM2Q9C040 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.16■□□□□ 0.02
TRIM2Q9C040 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM2Q9C040 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.16■□□□□ 0.02
TRIM2Q9C040 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM2Q9C040 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM2Q9C040 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM2Q9C040 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM2Q9C040 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM2Q9C040 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM2Q9C040 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.16■□□□□ 0.02
TRIM2Q9C040 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM2Q9C040 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.16■□□□□ 0.02
TRIM2Q9C040 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM2Q9C040 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM2Q9C040 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM2Q9C040 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.16■□□□□ 0.02
TRIM2Q9C040 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM2Q9C040 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.16■□□□□ 0.02
TRIM2Q9C040 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.16■□□□□ 0.02
TRIM2Q9C040 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM2Q9C040 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.16■□□□□ 0.02
TRIM2Q9C040 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.16■□□□□ 0.02
TRIM2Q9C040 AC021097.1-201ENST00000607902 574 ntBASIC15.16■□□□□ 0.02
TRIM2Q9C040 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.16■□□□□ 0.02
TRIM2Q9C040 AC006449.6-201ENST00000612330 2296 ntBASIC15.16■□□□□ 0.02
TRIM2Q9C040 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TRIM2Q9C040 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM2Q9C040 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM2Q9C040 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM2Q9C040 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM2Q9C040 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM2Q9C040 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM2Q9C040 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM2Q9C040 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM2Q9C040 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM2Q9C040 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM2Q9C040 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
TRIM2Q9C040 PMS2P7-201ENST00000506558 1336 ntBASIC15.16■□□□□ 0.02
TRIM2Q9C040 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM2Q9C040 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.16■□□□□ 0.02
TRIM2Q9C040 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM2Q9C040 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.15■□□□□ 0.02
TRIM2Q9C040 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.15■□□□□ 0.02
TRIM2Q9C040 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM2Q9C040 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM2Q9C040 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.15■□□□□ 0.02
TRIM2Q9C040 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms