Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.01■□□□□ 0.31
FOXP3Q9BZS1 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXP3Q9BZS1 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.01■□□□□ 0.31
FOXP3Q9BZS1 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXP3Q9BZS1 UPF3AP3-201ENST00000420996 769 ntBASIC17.01■□□□□ 0.31
FOXP3Q9BZS1 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.01■□□□□ 0.31
FOXP3Q9BZS1 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
FOXP3Q9BZS1 AL589182.2-201ENST00000619332 1049 ntBASIC17.01■□□□□ 0.31
FOXP3Q9BZS1 REXO1L3P-201ENST00000622202 1288 ntBASIC17.01■□□□□ 0.31
FOXP3Q9BZS1 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.01■□□□□ 0.31
FOXP3Q9BZS1 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
FOXP3Q9BZS1 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXP3Q9BZS1 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
FOXP3Q9BZS1 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
FOXP3Q9BZS1 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
FOXP3Q9BZS1 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.01■□□□□ 0.31
FOXP3Q9BZS1 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
FOXP3Q9BZS1 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
FOXP3Q9BZS1 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
FOXP3Q9BZS1 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
FOXP3Q9BZS1 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
FOXP3Q9BZS1 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXP3Q9BZS1 AC131009.4-201ENST00000624048 1740 ntBASIC17.01■□□□□ 0.31
FOXP3Q9BZS1 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXP3Q9BZS1 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXP3Q9BZS1 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
FOXP3Q9BZS1 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXP3Q9BZS1 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
FOXP3Q9BZS1 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXP3Q9BZS1 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXP3Q9BZS1 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
FOXP3Q9BZS1 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXP3Q9BZS1 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.01■□□□□ 0.31
FOXP3Q9BZS1 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
FOXP3Q9BZS1 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
FOXP3Q9BZS1 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
FOXP3Q9BZS1 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17■□□□□ 0.31
FOXP3Q9BZS1 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17■□□□□ 0.31
FOXP3Q9BZS1 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXP3Q9BZS1 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17■□□□□ 0.31
FOXP3Q9BZS1 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
FOXP3Q9BZS1 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXP3Q9BZS1 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXP3Q9BZS1 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXP3Q9BZS1 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17■□□□□ 0.31
FOXP3Q9BZS1 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXP3Q9BZS1 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
FOXP3Q9BZS1 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
FOXP3Q9BZS1 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXP3Q9BZS1 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17■□□□□ 0.31
FOXP3Q9BZS1 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXP3Q9BZS1 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17■□□□□ 0.31
FOXP3Q9BZS1 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXP3Q9BZS1 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17■□□□□ 0.31
FOXP3Q9BZS1 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17■□□□□ 0.31
FOXP3Q9BZS1 RPS8P6-201ENST00000426177 609 ntBASIC17■□□□□ 0.31
FOXP3Q9BZS1 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17■□□□□ 0.31
FOXP3Q9BZS1 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17■□□□□ 0.31
FOXP3Q9BZS1 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17■□□□□ 0.31
FOXP3Q9BZS1 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
FOXP3Q9BZS1 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17■□□□□ 0.31
FOXP3Q9BZS1 RNA5SP416-201ENST00000516838 111 ntBASIC17■□□□□ 0.31
FOXP3Q9BZS1 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
FOXP3Q9BZS1 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17■□□□□ 0.31
FOXP3Q9BZS1 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17■□□□□ 0.31
FOXP3Q9BZS1 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17■□□□□ 0.31
FOXP3Q9BZS1 MIR1199-201ENST00000621445 119 ntBASIC17■□□□□ 0.31
FOXP3Q9BZS1 AC022532.1-201ENST00000624563 1728 ntBASIC17■□□□□ 0.31
FOXP3Q9BZS1 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17■□□□□ 0.31
FOXP3Q9BZS1 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXP3Q9BZS1 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17■□□□□ 0.31
FOXP3Q9BZS1 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17■□□□□ 0.31
FOXP3Q9BZS1 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
FOXP3Q9BZS1 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXP3Q9BZS1 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17■□□□□ 0.31
FOXP3Q9BZS1 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXP3Q9BZS1 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
FOXP3Q9BZS1 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
FOXP3Q9BZS1 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXP3Q9BZS1 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
FOXP3Q9BZS1 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXP3Q9BZS1 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXP3Q9BZS1 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXP3Q9BZS1 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
FOXP3Q9BZS1 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXP3Q9BZS1 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
FOXP3Q9BZS1 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
FOXP3Q9BZS1 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
FOXP3Q9BZS1 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
FOXP3Q9BZS1 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXP3Q9BZS1 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXP3Q9BZS1 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.99■□□□□ 0.31
FOXP3Q9BZS1 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXP3Q9BZS1 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.99■□□□□ 0.31
FOXP3Q9BZS1 MIR648-201ENST00000385046 94 ntBASIC16.99■□□□□ 0.31
FOXP3Q9BZS1 YBX2P1-201ENST00000394192 760 ntBASIC16.99■□□□□ 0.31
FOXP3Q9BZS1 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.99■□□□□ 0.31
FOXP3Q9BZS1 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.99■□□□□ 0.31
FOXP3Q9BZS1 GPX1P2-201ENST00000429271 606 ntBASIC16.99■□□□□ 0.31
FOXP3Q9BZS1 AC009947.1-201ENST00000444350 727 ntBASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms