Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RTFDC1Q9BY42 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
RTFDC1Q9BY42 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTFDC1Q9BY42 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RTFDC1Q9BY42 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC19.73■□□□□ 0.75
RTFDC1Q9BY42 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RTFDC1Q9BY42 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTFDC1Q9BY42 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
RTFDC1Q9BY42 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RTFDC1Q9BY42 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RTFDC1Q9BY42 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTFDC1Q9BY42 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.73■□□□□ 0.75
RTFDC1Q9BY42 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC19.73■□□□□ 0.75
RTFDC1Q9BY42 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RTFDC1Q9BY42 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTFDC1Q9BY42 MPV17-208ENST00000405076 603 ntTSL 5 BASIC19.73■□□□□ 0.75
RTFDC1Q9BY42 RN7SL399P-201ENST00000471648 279 ntBASIC19.73■□□□□ 0.75
RTFDC1Q9BY42 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC19.73■□□□□ 0.75
RTFDC1Q9BY42 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC19.73■□□□□ 0.75
RTFDC1Q9BY42 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC19.73■□□□□ 0.75
RTFDC1Q9BY42 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC19.73■□□□□ 0.75
RTFDC1Q9BY42 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTFDC1Q9BY42 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTFDC1Q9BY42 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC19.73■□□□□ 0.75
RTFDC1Q9BY42 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RTFDC1Q9BY42 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RTFDC1Q9BY42 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTFDC1Q9BY42 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.73■□□□□ 0.75
RTFDC1Q9BY42 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.72■□□□□ 0.75
RTFDC1Q9BY42 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTFDC1Q9BY42 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTFDC1Q9BY42 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
RTFDC1Q9BY42 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTFDC1Q9BY42 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTFDC1Q9BY42 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTFDC1Q9BY42 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTFDC1Q9BY42 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
RTFDC1Q9BY42 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTFDC1Q9BY42 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTFDC1Q9BY42 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC19.72■□□□□ 0.75
RTFDC1Q9BY42 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC19.72■□□□□ 0.75
RTFDC1Q9BY42 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RTFDC1Q9BY42 SUOX-214ENST00000551841 906 ntTSL 3 BASIC19.72■□□□□ 0.75
RTFDC1Q9BY42 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC19.72■□□□□ 0.75
RTFDC1Q9BY42 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC19.72■□□□□ 0.75
RTFDC1Q9BY42 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC19.72■□□□□ 0.75
RTFDC1Q9BY42 AL365330.1-201ENST00000607459 531 ntBASIC19.72■□□□□ 0.75
RTFDC1Q9BY42 U82695.1-201ENST00000635752 1889 ntBASIC19.72■□□□□ 0.75
RTFDC1Q9BY42 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
RTFDC1Q9BY42 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RTFDC1Q9BY42 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTFDC1Q9BY42 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
RTFDC1Q9BY42 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTFDC1Q9BY42 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTFDC1Q9BY42 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RTFDC1Q9BY42 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTFDC1Q9BY42 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RTFDC1Q9BY42 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.71■□□□□ 0.75
RTFDC1Q9BY42 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTFDC1Q9BY42 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTFDC1Q9BY42 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC19.71■□□□□ 0.75
RTFDC1Q9BY42 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC19.71■□□□□ 0.75
RTFDC1Q9BY42 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.71■□□□□ 0.75
RTFDC1Q9BY42 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RTFDC1Q9BY42 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTFDC1Q9BY42 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTFDC1Q9BY42 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.71■□□□□ 0.75
RTFDC1Q9BY42 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTFDC1Q9BY42 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTFDC1Q9BY42 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RTFDC1Q9BY42 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC19.71■□□□□ 0.75
RTFDC1Q9BY42 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTFDC1Q9BY42 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTFDC1Q9BY42 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RTFDC1Q9BY42 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.71■□□□□ 0.75
RTFDC1Q9BY42 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC19.71■□□□□ 0.75
RTFDC1Q9BY42 MFF-223ENST00000524634 647 ntTSL 2 BASIC19.71■□□□□ 0.75
RTFDC1Q9BY42 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RTFDC1Q9BY42 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC19.71■□□□□ 0.75
RTFDC1Q9BY42 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTFDC1Q9BY42 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC19.71■□□□□ 0.75
RTFDC1Q9BY42 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC19.71■□□□□ 0.75
RTFDC1Q9BY42 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTFDC1Q9BY42 AC233724.13-201ENST00000598383 410 ntBASIC19.71■□□□□ 0.75
RTFDC1Q9BY42 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RTFDC1Q9BY42 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTFDC1Q9BY42 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RTFDC1Q9BY42 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC19.71■□□□□ 0.75
RTFDC1Q9BY42 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RTFDC1Q9BY42 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.71■□□□□ 0.75
RTFDC1Q9BY42 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RTFDC1Q9BY42 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTFDC1Q9BY42 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RTFDC1Q9BY42 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC19.71■□□□□ 0.75
RTFDC1Q9BY42 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
RTFDC1Q9BY42 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTFDC1Q9BY42 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTFDC1Q9BY42 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RTFDC1Q9BY42 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RTFDC1Q9BY42 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms