Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 ING5-213ENST00000636051 4199 ntTSL 5 BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 LINC00982-205ENST00000420957 435 ntBASIC9.87□□□□□ -0.83
LIMD2Q9BT23 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 PRYP5-201ENST00000451909 266 ntBASIC9.87□□□□□ -0.83
LIMD2Q9BT23 BET1L-206ENST00000486280 665 ntTSL 3 BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 AC106795.1-205ENST00000512851 1056 ntBASIC9.87□□□□□ -0.83
LIMD2Q9BT23 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 AC091304.2-201ENST00000564639 760 ntBASIC9.87□□□□□ -0.83
LIMD2Q9BT23 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 AL589182.2-201ENST00000619332 1049 ntBASIC9.87□□□□□ -0.83
LIMD2Q9BT23 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LIMD2Q9BT23 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC9.86□□□□□ -0.83
LIMD2Q9BT23 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms