Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
SLF1Q9BQI6 OARD1-208ENST00000469104 704 ntTSL 2 BASIC19.08■□□□□ 0.64
SLF1Q9BQI6 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SLF1Q9BQI6 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.08■□□□□ 0.64
SLF1Q9BQI6 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC19.08■□□□□ 0.64
SLF1Q9BQI6 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC19.08■□□□□ 0.64
SLF1Q9BQI6 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC19.08■□□□□ 0.64
SLF1Q9BQI6 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.08■□□□□ 0.64
SLF1Q9BQI6 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.08■□□□□ 0.64
SLF1Q9BQI6 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
SLF1Q9BQI6 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC19.08■□□□□ 0.64
SLF1Q9BQI6 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.08■□□□□ 0.64
SLF1Q9BQI6 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC19.08■□□□□ 0.64
SLF1Q9BQI6 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SLF1Q9BQI6 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.08■□□□□ 0.64
SLF1Q9BQI6 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.08■□□□□ 0.64
SLF1Q9BQI6 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SLF1Q9BQI6 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
SLF1Q9BQI6 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SLF1Q9BQI6 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLF1Q9BQI6 PCDHA14-201ENST00000506751 2298 ntBASIC19.08■□□□□ 0.64
SLF1Q9BQI6 AL512652.2-201ENST00000625156 1716 ntBASIC19.08■□□□□ 0.64
SLF1Q9BQI6 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC19.08■□□□□ 0.64
SLF1Q9BQI6 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
SLF1Q9BQI6 AC105020.1-201ENST00000435356 2205 ntBASIC19.08■□□□□ 0.64
SLF1Q9BQI6 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SLF1Q9BQI6 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SLF1Q9BQI6 AC100757.3-201ENST00000622361 1406 ntBASIC19.08■□□□□ 0.64
SLF1Q9BQI6 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLF1Q9BQI6 GOLGA2P9-201ENST00000596977 1937 ntBASIC19.08■□□□□ 0.64
SLF1Q9BQI6 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SLF1Q9BQI6 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
SLF1Q9BQI6 PCDHB19P-201ENST00000570871 2371 ntBASIC19.07■□□□□ 0.64
SLF1Q9BQI6 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLF1Q9BQI6 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
SLF1Q9BQI6 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SLF1Q9BQI6 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLF1Q9BQI6 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SLF1Q9BQI6 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SLF1Q9BQI6 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC19.07■□□□□ 0.64
SLF1Q9BQI6 FAM207CP-201ENST00000443486 507 ntBASIC19.07■□□□□ 0.64
SLF1Q9BQI6 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC19.07■□□□□ 0.64
SLF1Q9BQI6 AC004890.2-204ENST00000481968 304 ntBASIC19.07■□□□□ 0.64
SLF1Q9BQI6 TERF1P3-201ENST00000505638 1227 ntBASIC19.07■□□□□ 0.64
SLF1Q9BQI6 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC19.07■□□□□ 0.64
SLF1Q9BQI6 POLD4-211ENST00000539074 714 ntTSL 3 BASIC19.07■□□□□ 0.64
SLF1Q9BQI6 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SLF1Q9BQI6 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.07■□□□□ 0.64
SLF1Q9BQI6 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC19.07■□□□□ 0.64
SLF1Q9BQI6 YTHDF3-AS1-201ENST00000603538 718 ntBASIC19.07■□□□□ 0.64
SLF1Q9BQI6 HFE2-206ENST00000634927 506 ntTSL 4 BASIC19.07■□□□□ 0.64
SLF1Q9BQI6 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.07■□□□□ 0.64
SLF1Q9BQI6 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLF1Q9BQI6 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLF1Q9BQI6 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLF1Q9BQI6 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SLF1Q9BQI6 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
SLF1Q9BQI6 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.07■□□□□ 0.64
SLF1Q9BQI6 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
SLF1Q9BQI6 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLF1Q9BQI6 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLF1Q9BQI6 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLF1Q9BQI6 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLF1Q9BQI6 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLF1Q9BQI6 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC19.06■□□□□ 0.64
SLF1Q9BQI6 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SLF1Q9BQI6 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLF1Q9BQI6 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLF1Q9BQI6 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
SLF1Q9BQI6 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLF1Q9BQI6 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.06■□□□□ 0.64
SLF1Q9BQI6 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SLF1Q9BQI6 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SLF1Q9BQI6 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SLF1Q9BQI6 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLF1Q9BQI6 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SLF1Q9BQI6 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SLF1Q9BQI6 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SLF1Q9BQI6 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC19.06■□□□□ 0.64
SLF1Q9BQI6 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.06■□□□□ 0.64
SLF1Q9BQI6 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19.06■□□□□ 0.64
SLF1Q9BQI6 AL138828.2-201ENST00000615812 383 ntBASIC19.06■□□□□ 0.64
SLF1Q9BQI6 GPER1-207ENST00000619052 571 ntTSL 2 BASIC19.06■□□□□ 0.64
SLF1Q9BQI6 AL590560.3-201ENST00000623350 461 ntBASIC19.06■□□□□ 0.64
SLF1Q9BQI6 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLF1Q9BQI6 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.06■□□□□ 0.64
SLF1Q9BQI6 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC19.06■□□□□ 0.64
SLF1Q9BQI6 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.06■□□□□ 0.64
SLF1Q9BQI6 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLF1Q9BQI6 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SLF1Q9BQI6 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SLF1Q9BQI6 AL035456.1-201ENST00000456064 1369 ntBASIC19.06■□□□□ 0.64
SLF1Q9BQI6 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLF1Q9BQI6 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SLF1Q9BQI6 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SLF1Q9BQI6 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.05■□□□□ 0.64
SLF1Q9BQI6 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLF1Q9BQI6 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLF1Q9BQI6 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLF1Q9BQI6 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms