Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC17Q96LX7 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC17Q96LX7 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC17Q96LX7 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CCDC17Q96LX7 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC17Q96LX7 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CCDC17Q96LX7 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC17Q96LX7 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC17Q96LX7 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CCDC17Q96LX7 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CCDC17Q96LX7 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC17Q96LX7 CRB3P1-201ENST00000449338 276 ntBASIC19.04■□□□□ 0.64
CCDC17Q96LX7 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC17Q96LX7 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC17Q96LX7 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC17Q96LX7 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC19.04■□□□□ 0.64
CCDC17Q96LX7 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
CCDC17Q96LX7 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC17Q96LX7 MIR6069-201ENST00000620069 79 ntBASIC19.04■□□□□ 0.64
CCDC17Q96LX7 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC17Q96LX7 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC17Q96LX7 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CCDC17Q96LX7 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC17Q96LX7 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
CCDC17Q96LX7 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
CCDC17Q96LX7 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC17Q96LX7 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC17Q96LX7 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC17Q96LX7 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC17Q96LX7 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC17Q96LX7 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC17Q96LX7 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC17Q96LX7 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC17Q96LX7 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC17Q96LX7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC17Q96LX7 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CCDC17Q96LX7 COPE-202ENST00000349893 948 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC17Q96LX7 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CCDC17Q96LX7 CALY-202ENST00000368555 783 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC17Q96LX7 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC19.03■□□□□ 0.64
CCDC17Q96LX7 AC245100.5-201ENST00000452108 331 ntBASIC19.03■□□□□ 0.64
CCDC17Q96LX7 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC17Q96LX7 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.03■□□□□ 0.64
CCDC17Q96LX7 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC17Q96LX7 AC004233.3-201ENST00000607794 1269 ntBASIC19.03■□□□□ 0.64
CCDC17Q96LX7 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC19.03■□□□□ 0.64
CCDC17Q96LX7 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC17Q96LX7 AC004840.1-201ENST00000636359 365 ntBASIC19.03■□□□□ 0.64
CCDC17Q96LX7 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CCDC17Q96LX7 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CCDC17Q96LX7 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC17Q96LX7 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC17Q96LX7 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC17Q96LX7 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC17Q96LX7 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC17Q96LX7 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC17Q96LX7 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC17Q96LX7 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC17Q96LX7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC17Q96LX7 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC19.02■□□□□ 0.64
CCDC17Q96LX7 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC17Q96LX7 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CCDC17Q96LX7 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC17Q96LX7 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC17Q96LX7 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC17Q96LX7 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC17Q96LX7 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CCDC17Q96LX7 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CCDC17Q96LX7 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC17Q96LX7 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC17Q96LX7 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC17Q96LX7 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC17Q96LX7 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC19.02■□□□□ 0.64
CCDC17Q96LX7 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC17Q96LX7 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC19.02■□□□□ 0.64
CCDC17Q96LX7 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
CCDC17Q96LX7 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC19.02■□□□□ 0.64
CCDC17Q96LX7 AC135586.1-201ENST00000539323 574 ntBASIC19.02■□□□□ 0.64
CCDC17Q96LX7 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC17Q96LX7 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC19.02■□□□□ 0.64
CCDC17Q96LX7 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC17Q96LX7 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC17Q96LX7 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC17Q96LX7 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC17Q96LX7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
CCDC17Q96LX7 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.02■□□□□ 0.63
CCDC17Q96LX7 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.02■□□□□ 0.63
CCDC17Q96LX7 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC17Q96LX7 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.63
CCDC17Q96LX7 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC17Q96LX7 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC19.02■□□□□ 0.63
CCDC17Q96LX7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC17Q96LX7 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC17Q96LX7 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.02■□□□□ 0.63
CCDC17Q96LX7 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC17Q96LX7 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC17Q96LX7 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC17Q96LX7 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC17Q96LX7 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC17Q96LX7 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms