Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 TOP3BP1-201ENST00000420768 1380 ntBASIC15.9■□□□□ 0.14
RNF31Q96EP0 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF31Q96EP0 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF31Q96EP0 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.9■□□□□ 0.14
RNF31Q96EP0 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF31Q96EP0 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
RNF31Q96EP0 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF31Q96EP0 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF31Q96EP0 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF31Q96EP0 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF31Q96EP0 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.9■□□□□ 0.14
RNF31Q96EP0 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF31Q96EP0 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF31Q96EP0 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.9■□□□□ 0.14
RNF31Q96EP0 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF31Q96EP0 RN7SL589P-201ENST00000481268 310 ntBASIC15.9■□□□□ 0.14
RNF31Q96EP0 AC125807.1-201ENST00000483097 614 ntBASIC15.9■□□□□ 0.14
RNF31Q96EP0 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF31Q96EP0 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF31Q96EP0 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.9■□□□□ 0.14
RNF31Q96EP0 MPDU1-223ENST00000582151 728 ntBASIC15.9■□□□□ 0.14
RNF31Q96EP0 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.9■□□□□ 0.14
RNF31Q96EP0 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF31Q96EP0 AC027307.2-201ENST00000591252 911 ntBASIC15.9■□□□□ 0.14
RNF31Q96EP0 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
RNF31Q96EP0 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.9■□□□□ 0.14
RNF31Q96EP0 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.9■□□□□ 0.14
RNF31Q96EP0 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
RNF31Q96EP0 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF31Q96EP0 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
RNF31Q96EP0 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.9■□□□□ 0.14
RNF31Q96EP0 AL138688.1-201ENST00000624851 1594 ntBASIC15.9■□□□□ 0.14
RNF31Q96EP0 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
RNF31Q96EP0 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF31Q96EP0 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF31Q96EP0 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RNF31Q96EP0 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF31Q96EP0 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF31Q96EP0 TUBB3P1-201ENST00000405796 1332 ntBASIC15.9■□□□□ 0.14
RNF31Q96EP0 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF31Q96EP0 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF31Q96EP0 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF31Q96EP0 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
RNF31Q96EP0 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF31Q96EP0 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF31Q96EP0 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
RNF31Q96EP0 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF31Q96EP0 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF31Q96EP0 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF31Q96EP0 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF31Q96EP0 MST1L-201ENST00000442552 2185 ntBASIC15.89■□□□□ 0.13
RNF31Q96EP0 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF31Q96EP0 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF31Q96EP0 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.89■□□□□ 0.13
RNF31Q96EP0 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.89■□□□□ 0.13
RNF31Q96EP0 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF31Q96EP0 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF31Q96EP0 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF31Q96EP0 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF31Q96EP0 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF31Q96EP0 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF31Q96EP0 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.89■□□□□ 0.13
RNF31Q96EP0 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF31Q96EP0 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.89■□□□□ 0.13
RNF31Q96EP0 AC092474.2-201ENST00000424288 719 ntBASIC15.89■□□□□ 0.13
RNF31Q96EP0 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.89■□□□□ 0.13
RNF31Q96EP0 SPDYE14P-201ENST00000442619 822 ntBASIC15.89■□□□□ 0.13
RNF31Q96EP0 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.89■□□□□ 0.13
RNF31Q96EP0 AC087641.1-201ENST00000557561 1021 ntBASIC15.89■□□□□ 0.13
RNF31Q96EP0 LINC01225-203ENST00000563550 1244 ntBASIC15.89■□□□□ 0.13
RNF31Q96EP0 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF31Q96EP0 MIR4745-201ENST00000577608 62 ntBASIC15.89■□□□□ 0.13
RNF31Q96EP0 CYP2A7P1-201ENST00000595391 815 ntBASIC15.89■□□□□ 0.13
RNF31Q96EP0 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.89■□□□□ 0.13
RNF31Q96EP0 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.89■□□□□ 0.13
RNF31Q96EP0 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF31Q96EP0 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF31Q96EP0 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF31Q96EP0 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF31Q96EP0 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF31Q96EP0 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF31Q96EP0 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
RNF31Q96EP0 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
RNF31Q96EP0 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RNF31Q96EP0 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RNF31Q96EP0 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.89■□□□□ 0.13
RNF31Q96EP0 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF31Q96EP0 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
RNF31Q96EP0 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.89■□□□□ 0.13
RNF31Q96EP0 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF31Q96EP0 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF31Q96EP0 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF31Q96EP0 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF31Q96EP0 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF31Q96EP0 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF31Q96EP0 AC060834.1-201ENST00000443027 2032 ntBASIC15.89■□□□□ 0.13
RNF31Q96EP0 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF31Q96EP0 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RNF31Q96EP0 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF31Q96EP0 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms