Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHD5Q8TDI0 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CHD5Q8TDI0 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
CHD5Q8TDI0 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CHD5Q8TDI0 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHD5Q8TDI0 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHD5Q8TDI0 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHD5Q8TDI0 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHD5Q8TDI0 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHD5Q8TDI0 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.46■□□□□ 0.23
CHD5Q8TDI0 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CHD5Q8TDI0 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.46■□□□□ 0.23
CHD5Q8TDI0 PCDH8P1-201ENST00000428983 2773 ntBASIC16.46■□□□□ 0.23
CHD5Q8TDI0 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.23
CHD5Q8TDI0 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.46■□□□□ 0.23
CHD5Q8TDI0 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CHD5Q8TDI0 AL844908.2-201ENST00000609461 460 ntBASIC16.46■□□□□ 0.23
CHD5Q8TDI0 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.46■□□□□ 0.23
CHD5Q8TDI0 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CHD5Q8TDI0 AC106028.4-201ENST00000614509 607 ntBASIC16.46■□□□□ 0.23
CHD5Q8TDI0 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CHD5Q8TDI0 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHD5Q8TDI0 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CHD5Q8TDI0 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHD5Q8TDI0 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHD5Q8TDI0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
CHD5Q8TDI0 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CHD5Q8TDI0 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.22
CHD5Q8TDI0 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
CHD5Q8TDI0 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
CHD5Q8TDI0 TREML5P-201ENST00000421694 576 ntBASIC16.46■□□□□ 0.22
CHD5Q8TDI0 AC055876.3-201ENST00000431496 288 ntBASIC16.46■□□□□ 0.22
CHD5Q8TDI0 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.46■□□□□ 0.22
CHD5Q8TDI0 AC011467.4-201ENST00000594891 528 ntBASIC16.46■□□□□ 0.22
CHD5Q8TDI0 AC138649.4-201ENST00000612222 287 ntBASIC16.46■□□□□ 0.22
CHD5Q8TDI0 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHD5Q8TDI0 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHD5Q8TDI0 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHD5Q8TDI0 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.45■□□□□ 0.22
CHD5Q8TDI0 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHD5Q8TDI0 AP001282.1-201ENST00000531301 1499 ntBASIC16.45■□□□□ 0.22
CHD5Q8TDI0 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHD5Q8TDI0 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHD5Q8TDI0 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHD5Q8TDI0 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHD5Q8TDI0 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.45■□□□□ 0.22
CHD5Q8TDI0 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHD5Q8TDI0 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHD5Q8TDI0 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.45■□□□□ 0.22
CHD5Q8TDI0 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.45■□□□□ 0.22
CHD5Q8TDI0 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHD5Q8TDI0 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CHD5Q8TDI0 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CHD5Q8TDI0 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.45■□□□□ 0.22
CHD5Q8TDI0 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.45■□□□□ 0.22
CHD5Q8TDI0 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.45■□□□□ 0.22
CHD5Q8TDI0 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.45■□□□□ 0.22
CHD5Q8TDI0 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.45■□□□□ 0.22
CHD5Q8TDI0 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.45■□□□□ 0.22
CHD5Q8TDI0 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.45■□□□□ 0.22
CHD5Q8TDI0 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHD5Q8TDI0 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.45■□□□□ 0.22
CHD5Q8TDI0 CETN4P-206ENST00000642099 2168 ntBASIC16.45■□□□□ 0.22
CHD5Q8TDI0 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHD5Q8TDI0 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHD5Q8TDI0 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHD5Q8TDI0 AL691432.1-201ENST00000596308 1422 ntBASIC16.44■□□□□ 0.22
CHD5Q8TDI0 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHD5Q8TDI0 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CHD5Q8TDI0 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHD5Q8TDI0 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CHD5Q8TDI0 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.44■□□□□ 0.22
CHD5Q8TDI0 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CHD5Q8TDI0 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHD5Q8TDI0 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.44■□□□□ 0.22
CHD5Q8TDI0 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.44■□□□□ 0.22
CHD5Q8TDI0 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.44■□□□□ 0.22
CHD5Q8TDI0 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHD5Q8TDI0 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.44■□□□□ 0.22
CHD5Q8TDI0 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHD5Q8TDI0 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHD5Q8TDI0 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHD5Q8TDI0 FO538757.1-201ENST00000623083 1397 ntBASIC16.44■□□□□ 0.22
CHD5Q8TDI0 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.44■□□□□ 0.22
CHD5Q8TDI0 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHD5Q8TDI0 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.44■□□□□ 0.22
CHD5Q8TDI0 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.44■□□□□ 0.22
CHD5Q8TDI0 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.44■□□□□ 0.22
CHD5Q8TDI0 AL139010.1-201ENST00000454878 894 ntBASIC16.44■□□□□ 0.22
CHD5Q8TDI0 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.44■□□□□ 0.22
CHD5Q8TDI0 AL096865.1-201ENST00000606796 927 ntBASIC16.44■□□□□ 0.22
CHD5Q8TDI0 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.44■□□□□ 0.22
CHD5Q8TDI0 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHD5Q8TDI0 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHD5Q8TDI0 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.44■□□□□ 0.22
CHD5Q8TDI0 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHD5Q8TDI0 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHD5Q8TDI0 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHD5Q8TDI0 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHD5Q8TDI0 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms