Protein–RNA interactions for Protein: Q8N0V4

LGI2, Leucine-rich repeat LGI family member 2, humanhuman

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI2Q8N0V4 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LGI2Q8N0V4 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LGI2Q8N0V4 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LGI2Q8N0V4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LGI2Q8N0V4 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LGI2Q8N0V4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LGI2Q8N0V4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LGI2Q8N0V4 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LGI2Q8N0V4 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
LGI2Q8N0V4 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
LGI2Q8N0V4 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.92■□□□□ 0.3
LGI2Q8N0V4 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.92■□□□□ 0.3
LGI2Q8N0V4 AC098859.1-201ENST00000502915 1238 ntBASIC16.92■□□□□ 0.3
LGI2Q8N0V4 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.92■□□□□ 0.3
LGI2Q8N0V4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
LGI2Q8N0V4 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.92■□□□□ 0.3
LGI2Q8N0V4 AP3S2-216ENST00000617003 1561 ntBASIC16.92■□□□□ 0.3
LGI2Q8N0V4 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LGI2Q8N0V4 AC005622.1-201ENST00000636801 1703 ntBASIC16.92■□□□□ 0.3
LGI2Q8N0V4 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LGI2Q8N0V4 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LGI2Q8N0V4 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LGI2Q8N0V4 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LGI2Q8N0V4 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.92■□□□□ 0.3
LGI2Q8N0V4 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.92■□□□□ 0.3
LGI2Q8N0V4 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.92■□□□□ 0.3
LGI2Q8N0V4 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LGI2Q8N0V4 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LGI2Q8N0V4 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LGI2Q8N0V4 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.92■□□□□ 0.3
LGI2Q8N0V4 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
LGI2Q8N0V4 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
LGI2Q8N0V4 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.91■□□□□ 0.3
LGI2Q8N0V4 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LGI2Q8N0V4 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
LGI2Q8N0V4 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LGI2Q8N0V4 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LGI2Q8N0V4 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.91■□□□□ 0.3
LGI2Q8N0V4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
LGI2Q8N0V4 AC005052.1-201ENST00000625181 2492 ntBASIC16.91■□□□□ 0.3
LGI2Q8N0V4 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.91■□□□□ 0.3
LGI2Q8N0V4 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
LGI2Q8N0V4 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LGI2Q8N0V4 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LGI2Q8N0V4 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
LGI2Q8N0V4 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.91■□□□□ 0.3
LGI2Q8N0V4 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
LGI2Q8N0V4 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.91■□□□□ 0.3
LGI2Q8N0V4 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LGI2Q8N0V4 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LGI2Q8N0V4 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.91■□□□□ 0.3
LGI2Q8N0V4 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.91■□□□□ 0.3
LGI2Q8N0V4 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LGI2Q8N0V4 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.91■□□□□ 0.3
LGI2Q8N0V4 AL512356.2-201ENST00000546955 174 ntBASIC16.91■□□□□ 0.3
LGI2Q8N0V4 RARRES2P9-201ENST00000565168 469 ntBASIC16.91■□□□□ 0.3
LGI2Q8N0V4 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.91■□□□□ 0.3
LGI2Q8N0V4 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.91■□□□□ 0.3
LGI2Q8N0V4 MIR6080-201ENST00000617359 66 ntBASIC16.91■□□□□ 0.3
LGI2Q8N0V4 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
LGI2Q8N0V4 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.91■□□□□ 0.3
LGI2Q8N0V4 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.91■□□□□ 0.3
LGI2Q8N0V4 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.91■□□□□ 0.3
LGI2Q8N0V4 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.91■□□□□ 0.3
LGI2Q8N0V4 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LGI2Q8N0V4 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.91■□□□□ 0.3
LGI2Q8N0V4 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
LGI2Q8N0V4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
LGI2Q8N0V4 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.91■□□□□ 0.3
LGI2Q8N0V4 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
LGI2Q8N0V4 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LGI2Q8N0V4 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.91■□□□□ 0.3
LGI2Q8N0V4 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LGI2Q8N0V4 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
LGI2Q8N0V4 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LGI2Q8N0V4 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
LGI2Q8N0V4 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
LGI2Q8N0V4 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LGI2Q8N0V4 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LGI2Q8N0V4 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.9■□□□□ 0.3
LGI2Q8N0V4 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.9■□□□□ 0.3
LGI2Q8N0V4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LGI2Q8N0V4 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
LGI2Q8N0V4 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LGI2Q8N0V4 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
LGI2Q8N0V4 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LGI2Q8N0V4 HLA-H-201ENST00000383620 1096 ntBASIC16.9■□□□□ 0.3
LGI2Q8N0V4 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
LGI2Q8N0V4 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.9■□□□□ 0.3
LGI2Q8N0V4 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.9■□□□□ 0.3
LGI2Q8N0V4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.9■□□□□ 0.3
LGI2Q8N0V4 RFPL4AP1-201ENST00000530883 850 ntBASIC16.9■□□□□ 0.3
LGI2Q8N0V4 AC069262.1-201ENST00000539058 672 ntBASIC16.9■□□□□ 0.3
LGI2Q8N0V4 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.9■□□□□ 0.3
LGI2Q8N0V4 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.9■□□□□ 0.3
LGI2Q8N0V4 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.9■□□□□ 0.3
LGI2Q8N0V4 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.9■□□□□ 0.3
LGI2Q8N0V4 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.9■□□□□ 0.3
LGI2Q8N0V4 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LGI2Q8N0V4 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms