Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
APLFQ8IW19 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
APLFQ8IW19 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.4■□□□□ 0.22
APLFQ8IW19 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.4■□□□□ 0.22
APLFQ8IW19 MTHFR-217ENST00000641820 1569 ntBASIC16.4■□□□□ 0.22
APLFQ8IW19 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.4■□□□□ 0.22
APLFQ8IW19 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
APLFQ8IW19 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.4■□□□□ 0.22
APLFQ8IW19 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.4■□□□□ 0.22
APLFQ8IW19 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
APLFQ8IW19 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
APLFQ8IW19 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.4■□□□□ 0.22
APLFQ8IW19 SPDYE21P-201ENST00000413323 827 ntBASIC16.4■□□□□ 0.22
APLFQ8IW19 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
APLFQ8IW19 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
APLFQ8IW19 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.4■□□□□ 0.22
APLFQ8IW19 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
APLFQ8IW19 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
APLFQ8IW19 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.4■□□□□ 0.22
APLFQ8IW19 AL589182.2-201ENST00000619332 1049 ntBASIC16.4■□□□□ 0.22
APLFQ8IW19 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
APLFQ8IW19 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.4■□□□□ 0.22
APLFQ8IW19 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
APLFQ8IW19 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
APLFQ8IW19 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
APLFQ8IW19 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
APLFQ8IW19 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
APLFQ8IW19 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
APLFQ8IW19 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
APLFQ8IW19 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
APLFQ8IW19 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
APLFQ8IW19 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
APLFQ8IW19 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.39■□□□□ 0.22
APLFQ8IW19 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.39■□□□□ 0.21
APLFQ8IW19 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.39■□□□□ 0.21
APLFQ8IW19 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.39■□□□□ 0.21
APLFQ8IW19 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
APLFQ8IW19 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
APLFQ8IW19 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
APLFQ8IW19 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
APLFQ8IW19 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
APLFQ8IW19 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
APLFQ8IW19 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.39■□□□□ 0.21
APLFQ8IW19 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
APLFQ8IW19 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
APLFQ8IW19 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.39■□□□□ 0.21
APLFQ8IW19 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
APLFQ8IW19 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
APLFQ8IW19 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
APLFQ8IW19 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.39■□□□□ 0.21
APLFQ8IW19 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.39■□□□□ 0.21
APLFQ8IW19 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.39■□□□□ 0.21
APLFQ8IW19 RPS8P6-201ENST00000426177 609 ntBASIC16.39■□□□□ 0.21
APLFQ8IW19 AC108751.1-201ENST00000490852 363 ntBASIC16.39■□□□□ 0.21
APLFQ8IW19 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.39■□□□□ 0.21
APLFQ8IW19 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.39■□□□□ 0.21
APLFQ8IW19 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.39■□□□□ 0.21
APLFQ8IW19 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
APLFQ8IW19 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.39■□□□□ 0.21
APLFQ8IW19 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.39■□□□□ 0.21
APLFQ8IW19 AC064836.3-201ENST00000607928 673 ntBASIC16.39■□□□□ 0.21
APLFQ8IW19 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.39■□□□□ 0.21
APLFQ8IW19 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
APLFQ8IW19 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
APLFQ8IW19 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
APLFQ8IW19 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
APLFQ8IW19 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
APLFQ8IW19 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.39■□□□□ 0.21
APLFQ8IW19 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
APLFQ8IW19 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
APLFQ8IW19 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
APLFQ8IW19 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
APLFQ8IW19 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
APLFQ8IW19 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
APLFQ8IW19 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
APLFQ8IW19 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
APLFQ8IW19 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
APLFQ8IW19 AC010460.3-201ENST00000511359 1579 ntBASIC16.38■□□□□ 0.21
APLFQ8IW19 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
APLFQ8IW19 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
APLFQ8IW19 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
APLFQ8IW19 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
APLFQ8IW19 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
APLFQ8IW19 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.38■□□□□ 0.21
APLFQ8IW19 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
APLFQ8IW19 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.38■□□□□ 0.21
APLFQ8IW19 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.38■□□□□ 0.21
APLFQ8IW19 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
APLFQ8IW19 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
APLFQ8IW19 HMGN1P19-201ENST00000436976 333 ntBASIC16.38■□□□□ 0.21
APLFQ8IW19 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.38■□□□□ 0.21
APLFQ8IW19 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.38■□□□□ 0.21
APLFQ8IW19 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.38■□□□□ 0.21
APLFQ8IW19 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.38■□□□□ 0.21
APLFQ8IW19 AL355385.1-201ENST00000606123 409 ntBASIC16.38■□□□□ 0.21
APLFQ8IW19 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
APLFQ8IW19 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
APLFQ8IW19 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
APLFQ8IW19 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
APLFQ8IW19 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms