Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 RPS8P6-201ENST00000426177 609 ntBASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 SPDYE11-202ENST00000450699 704 ntBASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 RN7SL589P-201ENST00000481268 310 ntBASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 AC243562.1-201ENST00000560672 389 ntBASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 SPDYE9P-201ENST00000570642 692 ntBASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 SPDYE10P-202ENST00000612005 668 ntBASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 SPDYE8P-202ENST00000612377 668 ntBASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 LINC01144-201ENST00000626198 1710 ntBASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LYSMD3Q7Z3D4 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LYSMD3Q7Z3D4 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LYSMD3Q7Z3D4 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LYSMD3Q7Z3D4 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LYSMD3Q7Z3D4 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.52■□□□□ 0.24
LYSMD3Q7Z3D4 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LYSMD3Q7Z3D4 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LYSMD3Q7Z3D4 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.52■□□□□ 0.24
LYSMD3Q7Z3D4 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LYSMD3Q7Z3D4 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LYSMD3Q7Z3D4 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.52■□□□□ 0.24
LYSMD3Q7Z3D4 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.52■□□□□ 0.24
LYSMD3Q7Z3D4 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.52■□□□□ 0.24
LYSMD3Q7Z3D4 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LYSMD3Q7Z3D4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LYSMD3Q7Z3D4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LYSMD3Q7Z3D4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LYSMD3Q7Z3D4 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
LYSMD3Q7Z3D4 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.52■□□□□ 0.24
LYSMD3Q7Z3D4 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
LYSMD3Q7Z3D4 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.52■□□□□ 0.24
LYSMD3Q7Z3D4 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
LYSMD3Q7Z3D4 AP006288.1-201ENST00000446065 395 ntBASIC16.52■□□□□ 0.24
LYSMD3Q7Z3D4 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.52■□□□□ 0.24
LYSMD3Q7Z3D4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
LYSMD3Q7Z3D4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.52■□□□□ 0.24
LYSMD3Q7Z3D4 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.52■□□□□ 0.24
LYSMD3Q7Z3D4 AL138918.1-201ENST00000568306 659 ntBASIC16.52■□□□□ 0.24
LYSMD3Q7Z3D4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LYSMD3Q7Z3D4 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LYSMD3Q7Z3D4 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
LYSMD3Q7Z3D4 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LYSMD3Q7Z3D4 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LYSMD3Q7Z3D4 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
LYSMD3Q7Z3D4 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
LYSMD3Q7Z3D4 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LYSMD3Q7Z3D4 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
LYSMD3Q7Z3D4 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LYSMD3Q7Z3D4 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.52■□□□□ 0.23
LYSMD3Q7Z3D4 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
LYSMD3Q7Z3D4 AC092364.2-201ENST00000596710 2692 ntBASIC16.52■□□□□ 0.23
LYSMD3Q7Z3D4 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms