Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 MIR3687-2-201ENST00000577708 61 ntBASIC17.05■□□□□ 0.32
TRNP1Q6NT89 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.05■□□□□ 0.32
TRNP1Q6NT89 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.05■□□□□ 0.32
TRNP1Q6NT89 MIR3687-1-201ENST00000614492 61 ntBASIC17.05■□□□□ 0.32
TRNP1Q6NT89 SPTSSB-204ENST00000617024 1292 ntBASIC17.05■□□□□ 0.32
TRNP1Q6NT89 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.05■□□□□ 0.32
TRNP1Q6NT89 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRNP1Q6NT89 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRNP1Q6NT89 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TRNP1Q6NT89 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRNP1Q6NT89 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRNP1Q6NT89 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRNP1Q6NT89 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.05■□□□□ 0.32
TRNP1Q6NT89 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRNP1Q6NT89 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRNP1Q6NT89 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRNP1Q6NT89 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRNP1Q6NT89 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRNP1Q6NT89 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.04■□□□□ 0.32
TRNP1Q6NT89 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.04■□□□□ 0.32
TRNP1Q6NT89 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRNP1Q6NT89 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.04■□□□□ 0.32
TRNP1Q6NT89 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TRNP1Q6NT89 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.04■□□□□ 0.32
TRNP1Q6NT89 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRNP1Q6NT89 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRNP1Q6NT89 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRNP1Q6NT89 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRNP1Q6NT89 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRNP1Q6NT89 GPS2P2-201ENST00000430745 888 ntBASIC17.04■□□□□ 0.32
TRNP1Q6NT89 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.04■□□□□ 0.32
TRNP1Q6NT89 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.04■□□□□ 0.32
TRNP1Q6NT89 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
TRNP1Q6NT89 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.04■□□□□ 0.32
TRNP1Q6NT89 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.04■□□□□ 0.32
TRNP1Q6NT89 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.04■□□□□ 0.32
TRNP1Q6NT89 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.04■□□□□ 0.32
TRNP1Q6NT89 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.04■□□□□ 0.32
TRNP1Q6NT89 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.04■□□□□ 0.32
TRNP1Q6NT89 AC134684.3-201ENST00000641758 218 ntBASIC17.04■□□□□ 0.32
TRNP1Q6NT89 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRNP1Q6NT89 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.04■□□□□ 0.32
TRNP1Q6NT89 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRNP1Q6NT89 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRNP1Q6NT89 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRNP1Q6NT89 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRNP1Q6NT89 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRNP1Q6NT89 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.04■□□□□ 0.32
TRNP1Q6NT89 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
TRNP1Q6NT89 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TRNP1Q6NT89 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRNP1Q6NT89 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRNP1Q6NT89 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.03■□□□□ 0.32
TRNP1Q6NT89 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.03■□□□□ 0.32
TRNP1Q6NT89 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TRNP1Q6NT89 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRNP1Q6NT89 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.03■□□□□ 0.32
TRNP1Q6NT89 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.03■□□□□ 0.32
TRNP1Q6NT89 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.03■□□□□ 0.32
TRNP1Q6NT89 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.03■□□□□ 0.32
TRNP1Q6NT89 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.03■□□□□ 0.32
TRNP1Q6NT89 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TRNP1Q6NT89 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRNP1Q6NT89 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
TRNP1Q6NT89 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRNP1Q6NT89 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRNP1Q6NT89 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.03■□□□□ 0.32
TRNP1Q6NT89 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.03■□□□□ 0.32
TRNP1Q6NT89 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRNP1Q6NT89 KRT18P13-201ENST00000400056 1290 ntBASIC17.03■□□□□ 0.32
TRNP1Q6NT89 AC211486.1-202ENST00000416371 468 ntBASIC17.03■□□□□ 0.32
TRNP1Q6NT89 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRNP1Q6NT89 AC098859.1-201ENST00000502915 1238 ntBASIC17.03■□□□□ 0.32
TRNP1Q6NT89 AC211476.1-201ENST00000503899 468 ntBASIC17.03■□□□□ 0.32
TRNP1Q6NT89 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.03■□□□□ 0.32
TRNP1Q6NT89 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TRNP1Q6NT89 AC061975.2-201ENST00000581722 295 ntBASIC17.03■□□□□ 0.32
TRNP1Q6NT89 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.03■□□□□ 0.32
TRNP1Q6NT89 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRNP1Q6NT89 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.03■□□□□ 0.32
TRNP1Q6NT89 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TRNP1Q6NT89 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TRNP1Q6NT89 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRNP1Q6NT89 AL365203.3-201ENST00000609742 2057 ntBASIC17.03■□□□□ 0.32
TRNP1Q6NT89 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRNP1Q6NT89 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
TRNP1Q6NT89 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRNP1Q6NT89 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.02■□□□□ 0.32
TRNP1Q6NT89 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.02■□□□□ 0.32
TRNP1Q6NT89 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
TRNP1Q6NT89 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRNP1Q6NT89 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRNP1Q6NT89 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRNP1Q6NT89 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRNP1Q6NT89 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRNP1Q6NT89 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRNP1Q6NT89 AL627223.1-201ENST00000416693 442 ntBASIC17.02■□□□□ 0.32
TRNP1Q6NT89 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TRNP1Q6NT89 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRNP1Q6NT89 KRT8P23-201ENST00000560090 1207 ntBASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms