Protein–RNA interactions for Protein: Q3SXM0

DCAF4L1, DDB1- and CUL4-associated factor 4-like protein 1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF4L1Q3SXM0 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
DCAF4L1Q3SXM0 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
DCAF4L1Q3SXM0 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
DCAF4L1Q3SXM0 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DCAF4L1Q3SXM0 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
DCAF4L1Q3SXM0 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
DCAF4L1Q3SXM0 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
DCAF4L1Q3SXM0 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
DCAF4L1Q3SXM0 FLJ38576-201ENST00000623820 2459 ntBASIC17.72■□□□□ 0.43
DCAF4L1Q3SXM0 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
DCAF4L1Q3SXM0 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DCAF4L1Q3SXM0 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DCAF4L1Q3SXM0 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DCAF4L1Q3SXM0 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.71■□□□□ 0.43
DCAF4L1Q3SXM0 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
DCAF4L1Q3SXM0 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.71■□□□□ 0.43
DCAF4L1Q3SXM0 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
DCAF4L1Q3SXM0 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
DCAF4L1Q3SXM0 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.71■□□□□ 0.43
DCAF4L1Q3SXM0 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
DCAF4L1Q3SXM0 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.71■□□□□ 0.43
DCAF4L1Q3SXM0 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
DCAF4L1Q3SXM0 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DCAF4L1Q3SXM0 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.71■□□□□ 0.43
DCAF4L1Q3SXM0 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DCAF4L1Q3SXM0 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
DCAF4L1Q3SXM0 FAM8A3P-201ENST00000427218 844 ntBASIC17.71■□□□□ 0.43
DCAF4L1Q3SXM0 AC241585.1-201ENST00000433527 519 ntBASIC17.71■□□□□ 0.43
DCAF4L1Q3SXM0 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
DCAF4L1Q3SXM0 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.71■□□□□ 0.43
DCAF4L1Q3SXM0 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
DCAF4L1Q3SXM0 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.71■□□□□ 0.43
DCAF4L1Q3SXM0 MIR4321-201ENST00000592276 80 ntBASIC17.71■□□□□ 0.43
DCAF4L1Q3SXM0 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
DCAF4L1Q3SXM0 AC092364.2-202ENST00000597012 1073 ntBASIC17.71■□□□□ 0.43
DCAF4L1Q3SXM0 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.71■□□□□ 0.43
DCAF4L1Q3SXM0 AL589739.1-201ENST00000607720 493 ntBASIC17.71■□□□□ 0.43
DCAF4L1Q3SXM0 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
DCAF4L1Q3SXM0 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.71■□□□□ 0.43
DCAF4L1Q3SXM0 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
DCAF4L1Q3SXM0 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
DCAF4L1Q3SXM0 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DCAF4L1Q3SXM0 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
DCAF4L1Q3SXM0 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DCAF4L1Q3SXM0 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.71■□□□□ 0.43
DCAF4L1Q3SXM0 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.71■□□□□ 0.43
DCAF4L1Q3SXM0 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.71■□□□□ 0.43
DCAF4L1Q3SXM0 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
DCAF4L1Q3SXM0 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.71■□□□□ 0.42
DCAF4L1Q3SXM0 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.7■□□□□ 0.42
DCAF4L1Q3SXM0 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
DCAF4L1Q3SXM0 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.7■□□□□ 0.42
DCAF4L1Q3SXM0 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
DCAF4L1Q3SXM0 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DCAF4L1Q3SXM0 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
DCAF4L1Q3SXM0 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.7■□□□□ 0.42
DCAF4L1Q3SXM0 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
DCAF4L1Q3SXM0 AGGF1P2-201ENST00000426656 2106 ntBASIC17.7■□□□□ 0.42
DCAF4L1Q3SXM0 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
DCAF4L1Q3SXM0 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.7■□□□□ 0.42
DCAF4L1Q3SXM0 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.7■□□□□ 0.42
DCAF4L1Q3SXM0 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DCAF4L1Q3SXM0 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.7■□□□□ 0.42
DCAF4L1Q3SXM0 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.7■□□□□ 0.42
DCAF4L1Q3SXM0 AL133215.2-201ENST00000609242 977 ntBASIC17.7■□□□□ 0.42
DCAF4L1Q3SXM0 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DCAF4L1Q3SXM0 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DCAF4L1Q3SXM0 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DCAF4L1Q3SXM0 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.7■□□□□ 0.42
DCAF4L1Q3SXM0 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.7■□□□□ 0.42
DCAF4L1Q3SXM0 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DCAF4L1Q3SXM0 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DCAF4L1Q3SXM0 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DCAF4L1Q3SXM0 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.7■□□□□ 0.42
DCAF4L1Q3SXM0 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DCAF4L1Q3SXM0 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DCAF4L1Q3SXM0 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DCAF4L1Q3SXM0 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
DCAF4L1Q3SXM0 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DCAF4L1Q3SXM0 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DCAF4L1Q3SXM0 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.69■□□□□ 0.42
DCAF4L1Q3SXM0 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DCAF4L1Q3SXM0 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
DCAF4L1Q3SXM0 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DCAF4L1Q3SXM0 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
DCAF4L1Q3SXM0 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DCAF4L1Q3SXM0 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DCAF4L1Q3SXM0 AL592424.1-201ENST00000563624 1536 ntBASIC17.69■□□□□ 0.42
DCAF4L1Q3SXM0 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.69■□□□□ 0.42
DCAF4L1Q3SXM0 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.69■□□□□ 0.42
DCAF4L1Q3SXM0 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DCAF4L1Q3SXM0 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
DCAF4L1Q3SXM0 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.69■□□□□ 0.42
DCAF4L1Q3SXM0 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
DCAF4L1Q3SXM0 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DCAF4L1Q3SXM0 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DCAF4L1Q3SXM0 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DCAF4L1Q3SXM0 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DCAF4L1Q3SXM0 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.69■□□□□ 0.42
DCAF4L1Q3SXM0 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms