Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AL121956.5-201ENST00000625261 221 ntBASIC14.73□□□□□ -0.05
SCN1BQ07699 MYO15B-237ENST00000642007 4893 ntBASIC14.73□□□□□ -0.05
SCN1BQ07699 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SCN1BQ07699 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SCN1BQ07699 SNX18-202ENST00000343017 3140 ntBASIC14.73□□□□□ -0.05
SCN1BQ07699 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SCN1BQ07699 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SCN1BQ07699 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SCN1BQ07699 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.73□□□□□ -0.05
SCN1BQ07699 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
SCN1BQ07699 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.73□□□□□ -0.05
SCN1BQ07699 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SCN1BQ07699 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.73□□□□□ -0.05
SCN1BQ07699 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SCN1BQ07699 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SCN1BQ07699 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.72□□□□□ -0.05
SCN1BQ07699 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.72□□□□□ -0.05
SCN1BQ07699 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SCN1BQ07699 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SCN1BQ07699 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SCN1BQ07699 FRMD8P1-201ENST00000440433 1524 ntBASIC14.72□□□□□ -0.05
SCN1BQ07699 KRT18P1-202ENST00000452408 1331 ntBASIC14.72□□□□□ -0.05
SCN1BQ07699 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SCN1BQ07699 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SCN1BQ07699 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SCN1BQ07699 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SCN1BQ07699 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SCN1BQ07699 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SCN1BQ07699 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.72□□□□□ -0.05
SCN1BQ07699 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SCN1BQ07699 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.72□□□□□ -0.05
SCN1BQ07699 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SCN1BQ07699 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SCN1BQ07699 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
SCN1BQ07699 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
SCN1BQ07699 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC14.72□□□□□ -0.05
SCN1BQ07699 CHCHD2P8-201ENST00000429873 447 ntBASIC14.72□□□□□ -0.05
SCN1BQ07699 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SCN1BQ07699 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SCN1BQ07699 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SCN1BQ07699 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SCN1BQ07699 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC14.72□□□□□ -0.05
SCN1BQ07699 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC14.72□□□□□ -0.05
SCN1BQ07699 AC005336.2-201ENST00000593183 939 ntBASIC14.72□□□□□ -0.05
SCN1BQ07699 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
SCN1BQ07699 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SCN1BQ07699 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
SCN1BQ07699 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.72□□□□□ -0.05
SCN1BQ07699 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SCN1BQ07699 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SCN1BQ07699 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.72□□□□□ -0.05
SCN1BQ07699 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.72□□□□□ -0.05
SCN1BQ07699 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SCN1BQ07699 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SCN1BQ07699 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SCN1BQ07699 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SCN1BQ07699 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.72□□□□□ -0.05
SCN1BQ07699 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SCN1BQ07699 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.72□□□□□ -0.05
SCN1BQ07699 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SCN1BQ07699 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
SCN1BQ07699 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.72□□□□□ -0.05
SCN1BQ07699 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.72□□□□□ -0.05
SCN1BQ07699 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SCN1BQ07699 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.72□□□□□ -0.05
SCN1BQ07699 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SCN1BQ07699 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
SCN1BQ07699 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.71□□□□□ -0.05
SCN1BQ07699 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
SCN1BQ07699 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
SCN1BQ07699 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SCN1BQ07699 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.71□□□□□ -0.05
SCN1BQ07699 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.71□□□□□ -0.05
SCN1BQ07699 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC14.71□□□□□ -0.05
SCN1BQ07699 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SCN1BQ07699 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.71□□□□□ -0.05
SCN1BQ07699 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.71□□□□□ -0.05
SCN1BQ07699 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.71□□□□□ -0.05
SCN1BQ07699 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.71□□□□□ -0.05
SCN1BQ07699 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SCN1BQ07699 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
SCN1BQ07699 FAM220CP-201ENST00000395253 831 ntBASIC14.71□□□□□ -0.05
SCN1BQ07699 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.71□□□□□ -0.05
SCN1BQ07699 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SCN1BQ07699 AL845331.1-201ENST00000424978 1190 ntBASIC14.71□□□□□ -0.05
SCN1BQ07699 PTK2-216ENST00000519881 863 ntTSL 3 BASIC14.71□□□□□ -0.05
SCN1BQ07699 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.71□□□□□ -0.05
SCN1BQ07699 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC14.71□□□□□ -0.05
SCN1BQ07699 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.71□□□□□ -0.05
SCN1BQ07699 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
SCN1BQ07699 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SCN1BQ07699 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.71□□□□□ -0.05
SCN1BQ07699 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.71□□□□□ -0.05
SCN1BQ07699 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SCN1BQ07699 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
SCN1BQ07699 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
SCN1BQ07699 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.71□□□□□ -0.05
SCN1BQ07699 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
SCN1BQ07699 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
SCN1BQ07699 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms