Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.65■□□□□ 0.1
CLDN8P56748 AL031432.2-201ENST00000566714 459 ntBASIC15.65■□□□□ 0.1
CLDN8P56748 AL928711.1-201ENST00000570165 459 ntBASIC15.65■□□□□ 0.1
CLDN8P56748 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.65■□□□□ 0.1
CLDN8P56748 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.65■□□□□ 0.1
CLDN8P56748 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CLDN8P56748 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.65■□□□□ 0.1
CLDN8P56748 AC148477.8-201ENST00000624298 468 ntBASIC15.65■□□□□ 0.1
CLDN8P56748 AC117500.6-201ENST00000624871 588 ntBASIC15.65■□□□□ 0.1
CLDN8P56748 FAM215A-202ENST00000632077 792 ntBASIC15.65■□□□□ 0.1
CLDN8P56748 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.65■□□□□ 0.1
CLDN8P56748 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN8P56748 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN8P56748 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.65■□□□□ 0.1
CLDN8P56748 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN8P56748 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN8P56748 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN8P56748 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.65■□□□□ 0.1
CLDN8P56748 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN8P56748 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CLDN8P56748 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN8P56748 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
CLDN8P56748 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
CLDN8P56748 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN8P56748 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN8P56748 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN8P56748 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN8P56748 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.64■□□□□ 0.09
CLDN8P56748 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN8P56748 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CLDN8P56748 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.64■□□□□ 0.09
CLDN8P56748 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN8P56748 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN8P56748 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.64■□□□□ 0.09
CLDN8P56748 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.64■□□□□ 0.09
CLDN8P56748 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN8P56748 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
CLDN8P56748 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN8P56748 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN8P56748 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.64■□□□□ 0.09
CLDN8P56748 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN8P56748 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN8P56748 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN8P56748 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.64■□□□□ 0.09
CLDN8P56748 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN8P56748 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN8P56748 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN8P56748 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN8P56748 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.64■□□□□ 0.09
CLDN8P56748 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN8P56748 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN8P56748 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN8P56748 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN8P56748 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN8P56748 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN8P56748 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.64■□□□□ 0.09
CLDN8P56748 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CLDN8P56748 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN8P56748 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN8P56748 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN8P56748 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN8P56748 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN8P56748 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
CLDN8P56748 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CLDN8P56748 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.63■□□□□ 0.09
CLDN8P56748 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.63■□□□□ 0.09
CLDN8P56748 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CLDN8P56748 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN8P56748 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN8P56748 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN8P56748 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.63■□□□□ 0.09
CLDN8P56748 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN8P56748 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.63■□□□□ 0.09
CLDN8P56748 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN8P56748 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN8P56748 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN8P56748 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CLDN8P56748 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.63■□□□□ 0.09
CLDN8P56748 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.63■□□□□ 0.09
CLDN8P56748 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.63■□□□□ 0.09
CLDN8P56748 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.63■□□□□ 0.09
CLDN8P56748 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.63■□□□□ 0.09
CLDN8P56748 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.63■□□□□ 0.09
CLDN8P56748 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN8P56748 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.63■□□□□ 0.09
CLDN8P56748 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CLDN8P56748 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
CLDN8P56748 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.63■□□□□ 0.09
CLDN8P56748 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN8P56748 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN8P56748 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.63■□□□□ 0.09
CLDN8P56748 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN8P56748 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN8P56748 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN8P56748 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN8P56748 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN8P56748 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN8P56748 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.62■□□□□ 0.09
CLDN8P56748 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CLDN8P56748 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms