Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH6P55285 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH6P55285 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH6P55285 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDH6P55285 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH6P55285 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH6P55285 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CDH6P55285 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH6P55285 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CDH6P55285 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH6P55285 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH6P55285 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH6P55285 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH6P55285 AC005622.1-201ENST00000636801 1703 ntBASIC17.13■□□□□ 0.33
CDH6P55285 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH6P55285 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CDH6P55285 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH6P55285 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH6P55285 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH6P55285 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH6P55285 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CDH6P55285 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH6P55285 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH6P55285 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.13■□□□□ 0.33
CDH6P55285 AC109635.5-201ENST00000533593 962 ntBASIC17.13■□□□□ 0.33
CDH6P55285 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.13■□□□□ 0.33
CDH6P55285 AC027601.4-201ENST00000611259 610 ntBASIC17.13■□□□□ 0.33
CDH6P55285 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.13■□□□□ 0.33
CDH6P55285 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH6P55285 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH6P55285 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH6P55285 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH6P55285 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH6P55285 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH6P55285 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH6P55285 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH6P55285 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH6P55285 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.13■□□□□ 0.33
CDH6P55285 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH6P55285 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH6P55285 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.12■□□□□ 0.33
CDH6P55285 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH6P55285 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH6P55285 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
CDH6P55285 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH6P55285 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH6P55285 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CDH6P55285 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH6P55285 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH6P55285 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.12■□□□□ 0.33
CDH6P55285 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CDH6P55285 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.12■□□□□ 0.33
CDH6P55285 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH6P55285 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.12■□□□□ 0.33
CDH6P55285 AC140658.5-201ENST00000438532 169 ntBASIC17.12■□□□□ 0.33
CDH6P55285 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.12■□□□□ 0.33
CDH6P55285 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CDH6P55285 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH6P55285 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.12■□□□□ 0.33
CDH6P55285 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH6P55285 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.12■□□□□ 0.33
CDH6P55285 FAM197Y3-203ENST00000618346 717 ntBASIC17.12■□□□□ 0.33
CDH6P55285 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH6P55285 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH6P55285 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.12■□□□□ 0.33
CDH6P55285 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CDH6P55285 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH6P55285 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH6P55285 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH6P55285 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
CDH6P55285 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH6P55285 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH6P55285 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH6P55285 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CDH6P55285 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH6P55285 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH6P55285 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH6P55285 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH6P55285 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CDH6P55285 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH6P55285 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH6P55285 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH6P55285 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH6P55285 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH6P55285 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH6P55285 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH6P55285 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH6P55285 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH6P55285 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH6P55285 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.11■□□□□ 0.33
CDH6P55285 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CDH6P55285 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH6P55285 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.11■□□□□ 0.33
CDH6P55285 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH6P55285 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.11■□□□□ 0.33
CDH6P55285 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CDH6P55285 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CDH6P55285 MED15P5-201ENST00000423150 992 ntBASIC17.11■□□□□ 0.33
CDH6P55285 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.11■□□□□ 0.33
CDH6P55285 RNA5SP416-201ENST00000516838 111 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms