Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
LIMK2P53671 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LIMK2P53671 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LIMK2P53671 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
LIMK2P53671 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
LIMK2P53671 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LIMK2P53671 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LIMK2P53671 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LIMK2P53671 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LIMK2P53671 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LIMK2P53671 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LIMK2P53671 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LIMK2P53671 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LIMK2P53671 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.6■□□□□ 0.25
LIMK2P53671 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LIMK2P53671 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.6■□□□□ 0.25
LIMK2P53671 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LIMK2P53671 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.6■□□□□ 0.25
LIMK2P53671 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LIMK2P53671 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LIMK2P53671 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
LIMK2P53671 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.6■□□□□ 0.25
LIMK2P53671 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.6■□□□□ 0.25
LIMK2P53671 HTR5BP-201ENST00000430851 1154 ntBASIC16.6■□□□□ 0.25
LIMK2P53671 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.6■□□□□ 0.25
LIMK2P53671 RHOQP3-201ENST00000437982 621 ntBASIC16.6■□□□□ 0.25
LIMK2P53671 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.6■□□□□ 0.25
LIMK2P53671 AC087641.1-201ENST00000557561 1021 ntBASIC16.6■□□□□ 0.25
LIMK2P53671 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.6■□□□□ 0.25
LIMK2P53671 AC005412.3-201ENST00000580309 715 ntBASIC16.6■□□□□ 0.25
LIMK2P53671 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.6■□□□□ 0.25
LIMK2P53671 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.6■□□□□ 0.25
LIMK2P53671 AC004877.2-201ENST00000623941 599 ntBASIC16.6■□□□□ 0.25
LIMK2P53671 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LIMK2P53671 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.6■□□□□ 0.25
LIMK2P53671 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LIMK2P53671 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LIMK2P53671 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LIMK2P53671 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LIMK2P53671 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LIMK2P53671 AC105917.1-201ENST00000506637 2539 ntBASIC16.6■□□□□ 0.25
LIMK2P53671 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.6■□□□□ 0.25
LIMK2P53671 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LIMK2P53671 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LIMK2P53671 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LIMK2P53671 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.6■□□□□ 0.25
LIMK2P53671 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LIMK2P53671 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.6■□□□□ 0.25
LIMK2P53671 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.6■□□□□ 0.25
LIMK2P53671 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LIMK2P53671 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LIMK2P53671 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LIMK2P53671 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LIMK2P53671 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LIMK2P53671 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LIMK2P53671 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
LIMK2P53671 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LIMK2P53671 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LIMK2P53671 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LIMK2P53671 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
LIMK2P53671 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LIMK2P53671 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.59■□□□□ 0.25
LIMK2P53671 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.59■□□□□ 0.25
LIMK2P53671 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LIMK2P53671 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LIMK2P53671 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.59■□□□□ 0.25
LIMK2P53671 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.59■□□□□ 0.25
LIMK2P53671 PDPK2P-202ENST00000562415 1191 ntBASIC16.59■□□□□ 0.25
LIMK2P53671 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
LIMK2P53671 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.59■□□□□ 0.25
LIMK2P53671 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.59■□□□□ 0.25
LIMK2P53671 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.59■□□□□ 0.25
LIMK2P53671 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.59■□□□□ 0.25
LIMK2P53671 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.59■□□□□ 0.25
LIMK2P53671 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LIMK2P53671 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.59■□□□□ 0.25
LIMK2P53671 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LIMK2P53671 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LIMK2P53671 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LIMK2P53671 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
LIMK2P53671 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
LIMK2P53671 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.59■□□□□ 0.25
LIMK2P53671 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.59■□□□□ 0.25
LIMK2P53671 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.59■□□□□ 0.25
LIMK2P53671 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LIMK2P53671 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LIMK2P53671 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LIMK2P53671 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
LIMK2P53671 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LIMK2P53671 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.58■□□□□ 0.25
LIMK2P53671 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LIMK2P53671 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
LIMK2P53671 PAUPAR-201ENST00000630360 2965 ntBASIC16.58■□□□□ 0.24
LIMK2P53671 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.58■□□□□ 0.24
LIMK2P53671 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LIMK2P53671 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LIMK2P53671 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
LIMK2P53671 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LIMK2P53671 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LIMK2P53671 AC254562.1-201ENST00000417586 456 ntBASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms