Protein–RNA interactions for Protein: P52799

EFNB2, Ephrin-B2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB2P52799 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
EFNB2P52799 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
EFNB2P52799 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
EFNB2P52799 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.27□□□□□ -0.13
EFNB2P52799 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.27□□□□□ -0.13
EFNB2P52799 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.27□□□□□ -0.13
EFNB2P52799 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
EFNB2P52799 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.27□□□□□ -0.13
EFNB2P52799 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.27□□□□□ -0.13
EFNB2P52799 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
EFNB2P52799 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.27□□□□□ -0.13
EFNB2P52799 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.27□□□□□ -0.13
EFNB2P52799 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
EFNB2P52799 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EFNB2P52799 SLC25A6P4-201ENST00000586535 553 ntBASIC14.27□□□□□ -0.13
EFNB2P52799 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EFNB2P52799 AC073592.4-201ENST00000623827 446 ntBASIC14.27□□□□□ -0.13
EFNB2P52799 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.27□□□□□ -0.13
EFNB2P52799 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.27□□□□□ -0.13
EFNB2P52799 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EFNB2P52799 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EFNB2P52799 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.27□□□□□ -0.13
EFNB2P52799 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
EFNB2P52799 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EFNB2P52799 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EFNB2P52799 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.27□□□□□ -0.13
EFNB2P52799 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EFNB2P52799 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EFNB2P52799 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EFNB2P52799 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
EFNB2P52799 PCGF3-213ENST00000620529 1899 ntBASIC14.27□□□□□ -0.13
EFNB2P52799 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.27□□□□□ -0.13
EFNB2P52799 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EFNB2P52799 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB2P52799 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.26□□□□□ -0.13
EFNB2P52799 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
EFNB2P52799 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB2P52799 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB2P52799 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB2P52799 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.26□□□□□ -0.13
EFNB2P52799 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB2P52799 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB2P52799 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
EFNB2P52799 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB2P52799 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB2P52799 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.26□□□□□ -0.13
EFNB2P52799 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB2P52799 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
EFNB2P52799 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB2P52799 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB2P52799 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB2P52799 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
EFNB2P52799 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB2P52799 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB2P52799 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB2P52799 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.26□□□□□ -0.13
EFNB2P52799 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB2P52799 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.26□□□□□ -0.13
EFNB2P52799 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB2P52799 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB2P52799 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB2P52799 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.26□□□□□ -0.13
EFNB2P52799 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
EFNB2P52799 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.26□□□□□ -0.13
EFNB2P52799 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.26□□□□□ -0.13
EFNB2P52799 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.26□□□□□ -0.13
EFNB2P52799 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.26□□□□□ -0.13
EFNB2P52799 MPDU1-223ENST00000582151 728 ntBASIC14.26□□□□□ -0.13
EFNB2P52799 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.26□□□□□ -0.13
EFNB2P52799 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
EFNB2P52799 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB2P52799 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.26□□□□□ -0.13
EFNB2P52799 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.26□□□□□ -0.13
EFNB2P52799 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB2P52799 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB2P52799 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB2P52799 LINC02228-204ENST00000642115 2962 ntBASIC14.26□□□□□ -0.13
EFNB2P52799 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB2P52799 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB2P52799 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB2P52799 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB2P52799 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.26□□□□□ -0.13
EFNB2P52799 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
EFNB2P52799 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
EFNB2P52799 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB2P52799 AC079776.2-201ENST00000641154 1609 ntBASIC14.26□□□□□ -0.13
EFNB2P52799 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
EFNB2P52799 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.26□□□□□ -0.13
EFNB2P52799 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
EFNB2P52799 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB2P52799 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
EFNB2P52799 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
EFNB2P52799 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB2P52799 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB2P52799 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB2P52799 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB2P52799 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB2P52799 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.25□□□□□ -0.13
EFNB2P52799 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
EFNB2P52799 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms