Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTNNA1P35221 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CTNNA1P35221 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.43■□□□□ 0.38
CTNNA1P35221 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CTNNA1P35221 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTNNA1P35221 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.43■□□□□ 0.38
CTNNA1P35221 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTNNA1P35221 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.43■□□□□ 0.38
CTNNA1P35221 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.43■□□□□ 0.38
CTNNA1P35221 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CTNNA1P35221 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTNNA1P35221 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTNNA1P35221 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CTNNA1P35221 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CTNNA1P35221 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTNNA1P35221 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CTNNA1P35221 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CTNNA1P35221 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTNNA1P35221 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTNNA1P35221 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTNNA1P35221 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CTNNA1P35221 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.42■□□□□ 0.38
CTNNA1P35221 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTNNA1P35221 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTNNA1P35221 AC126177.1-201ENST00000547829 2218 ntBASIC17.42■□□□□ 0.38
CTNNA1P35221 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTNNA1P35221 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CTNNA1P35221 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.42■□□□□ 0.38
CTNNA1P35221 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.42■□□□□ 0.38
CTNNA1P35221 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.42■□□□□ 0.38
CTNNA1P35221 GGTLC5P-201ENST00000617623 998 ntBASIC17.42■□□□□ 0.38
CTNNA1P35221 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CTNNA1P35221 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.42■□□□□ 0.38
CTNNA1P35221 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTNNA1P35221 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTNNA1P35221 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.42■□□□□ 0.38
CTNNA1P35221 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CTNNA1P35221 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CTNNA1P35221 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.42■□□□□ 0.38
CTNNA1P35221 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
CTNNA1P35221 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTNNA1P35221 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CTNNA1P35221 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.42■□□□□ 0.38
CTNNA1P35221 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTNNA1P35221 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CTNNA1P35221 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CTNNA1P35221 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CTNNA1P35221 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTNNA1P35221 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CTNNA1P35221 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CTNNA1P35221 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CTNNA1P35221 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTNNA1P35221 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTNNA1P35221 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CTNNA1P35221 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTNNA1P35221 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.41■□□□□ 0.38
CTNNA1P35221 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CTNNA1P35221 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.41■□□□□ 0.38
CTNNA1P35221 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CTNNA1P35221 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.41■□□□□ 0.38
CTNNA1P35221 NORAD-201ENST00000565493 5339 ntBASIC17.41■□□□□ 0.38
CTNNA1P35221 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTNNA1P35221 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTNNA1P35221 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CTNNA1P35221 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTNNA1P35221 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.41■□□□□ 0.38
CTNNA1P35221 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTNNA1P35221 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.41■□□□□ 0.38
CTNNA1P35221 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.41■□□□□ 0.38
CTNNA1P35221 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTNNA1P35221 MIR1224-201ENST00000408193 85 ntBASIC17.41■□□□□ 0.38
CTNNA1P35221 HCG4-201ENST00000418983 998 ntBASIC17.41■□□□□ 0.38
CTNNA1P35221 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.41■□□□□ 0.38
CTNNA1P35221 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.41■□□□□ 0.38
CTNNA1P35221 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTNNA1P35221 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTNNA1P35221 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTNNA1P35221 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CTNNA1P35221 AC010654.1-201ENST00000615722 808 ntBASIC17.41■□□□□ 0.38
CTNNA1P35221 AP001350.2-201ENST00000625104 1094 ntBASIC17.41■□□□□ 0.38
CTNNA1P35221 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTNNA1P35221 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTNNA1P35221 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
CTNNA1P35221 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTNNA1P35221 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTNNA1P35221 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTNNA1P35221 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTNNA1P35221 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CTNNA1P35221 AC129492.6-201ENST00000611383 1305 ntBASIC17.41■□□□□ 0.38
CTNNA1P35221 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTNNA1P35221 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTNNA1P35221 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTNNA1P35221 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.41■□□□□ 0.38
CTNNA1P35221 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTNNA1P35221 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTNNA1P35221 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTNNA1P35221 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTNNA1P35221 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTNNA1P35221 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTNNA1P35221 REXO1L8P-201ENST00000604378 1897 ntBASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms