Protein–RNA interactions for Protein: P34903

GABRA3, Gamma-aminobutyric acid receptor subunit alpha-3, humanhuman

Predictions only

Length 492 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA3P34903 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GABRA3P34903 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GABRA3P34903 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
GABRA3P34903 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GABRA3P34903 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GABRA3P34903 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
GABRA3P34903 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
GABRA3P34903 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
GABRA3P34903 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
GABRA3P34903 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.32■□□□□ 0.04
GABRA3P34903 KRT18P34-201ENST00000488218 1270 ntBASIC15.32■□□□□ 0.04
GABRA3P34903 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.32■□□□□ 0.04
GABRA3P34903 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GABRA3P34903 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.32■□□□□ 0.04
GABRA3P34903 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
GABRA3P34903 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.32■□□□□ 0.04
GABRA3P34903 AP002472.1-201ENST00000577490 586 ntBASIC15.32■□□□□ 0.04
GABRA3P34903 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.32■□□□□ 0.04
GABRA3P34903 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.32■□□□□ 0.04
GABRA3P34903 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.32■□□□□ 0.04
GABRA3P34903 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
GABRA3P34903 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
GABRA3P34903 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
GABRA3P34903 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
GABRA3P34903 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
GABRA3P34903 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
GABRA3P34903 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
GABRA3P34903 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GABRA3P34903 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GABRA3P34903 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GABRA3P34903 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
GABRA3P34903 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.31■□□□□ 0.04
GABRA3P34903 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.31■□□□□ 0.04
GABRA3P34903 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GABRA3P34903 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
GABRA3P34903 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GABRA3P34903 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GABRA3P34903 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
GABRA3P34903 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GABRA3P34903 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
GABRA3P34903 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.31■□□□□ 0.04
GABRA3P34903 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GABRA3P34903 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.31■□□□□ 0.04
GABRA3P34903 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GABRA3P34903 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GABRA3P34903 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GABRA3P34903 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GABRA3P34903 AC002056.1-201ENST00000395613 760 ntBASIC15.31■□□□□ 0.04
GABRA3P34903 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GABRA3P34903 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GABRA3P34903 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.31■□□□□ 0.04
GABRA3P34903 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.31■□□□□ 0.04
GABRA3P34903 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.31■□□□□ 0.04
GABRA3P34903 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GABRA3P34903 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
GABRA3P34903 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GABRA3P34903 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.31■□□□□ 0.04
GABRA3P34903 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
GABRA3P34903 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.31■□□□□ 0.04
GABRA3P34903 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
GABRA3P34903 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.31■□□□□ 0.04
GABRA3P34903 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.31■□□□□ 0.04
GABRA3P34903 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GABRA3P34903 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
GABRA3P34903 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.31■□□□□ 0.04
GABRA3P34903 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.31■□□□□ 0.04
GABRA3P34903 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.31■□□□□ 0.04
GABRA3P34903 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GABRA3P34903 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.31■□□□□ 0.04
GABRA3P34903 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.31■□□□□ 0.04
GABRA3P34903 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GABRA3P34903 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
GABRA3P34903 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
GABRA3P34903 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GABRA3P34903 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
GABRA3P34903 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GABRA3P34903 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GABRA3P34903 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GABRA3P34903 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.31■□□□□ 0.04
GABRA3P34903 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GABRA3P34903 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GABRA3P34903 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
GABRA3P34903 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GABRA3P34903 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
GABRA3P34903 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.31■□□□□ 0.04
GABRA3P34903 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GABRA3P34903 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GABRA3P34903 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.3■□□□□ 0.04
GABRA3P34903 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GABRA3P34903 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GABRA3P34903 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
GABRA3P34903 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
GABRA3P34903 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GABRA3P34903 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GABRA3P34903 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.3■□□□□ 0.04
GABRA3P34903 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
GABRA3P34903 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
GABRA3P34903 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GABRA3P34903 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
GABRA3P34903 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms