Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
VAMP1P23763 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VAMP1P23763 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VAMP1P23763 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VAMP1P23763 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VAMP1P23763 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VAMP1P23763 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
VAMP1P23763 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VAMP1P23763 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VAMP1P23763 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.17
VAMP1P23763 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VAMP1P23763 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.96□□□□□ -0.17
VAMP1P23763 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC13.96□□□□□ -0.17
VAMP1P23763 FOS-208ENST00000555686 1496 ntTSL 2 BASIC13.96□□□□□ -0.17
VAMP1P23763 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VAMP1P23763 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
VAMP1P23763 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC13.96□□□□□ -0.17
VAMP1P23763 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VAMP1P23763 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
VAMP1P23763 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
VAMP1P23763 AL359075.1-203ENST00000462729 1002 ntBASIC13.96□□□□□ -0.17
VAMP1P23763 AC098590.1-201ENST00000468126 897 ntBASIC13.96□□□□□ -0.17
VAMP1P23763 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
VAMP1P23763 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VAMP1P23763 AL355075.4-201ENST00000554988 638 ntBASIC13.96□□□□□ -0.17
VAMP1P23763 CLN6-221ENST00000637494 765 ntTSL 5 BASIC13.96□□□□□ -0.17
VAMP1P23763 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.96□□□□□ -0.17
VAMP1P23763 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VAMP1P23763 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.96□□□□□ -0.17
VAMP1P23763 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VAMP1P23763 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC13.96□□□□□ -0.17
VAMP1P23763 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC13.96□□□□□ -0.17
VAMP1P23763 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
VAMP1P23763 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
VAMP1P23763 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.96□□□□□ -0.18
VAMP1P23763 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC13.96□□□□□ -0.18
VAMP1P23763 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
VAMP1P23763 AC138969.2-201ENST00000532739 9932 ntBASIC13.96□□□□□ -0.18
VAMP1P23763 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
VAMP1P23763 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
VAMP1P23763 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
VAMP1P23763 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
VAMP1P23763 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.95□□□□□ -0.18
VAMP1P23763 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VAMP1P23763 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.95□□□□□ -0.18
VAMP1P23763 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VAMP1P23763 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
VAMP1P23763 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.95□□□□□ -0.18
VAMP1P23763 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.95□□□□□ -0.18
VAMP1P23763 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VAMP1P23763 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VAMP1P23763 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VAMP1P23763 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VAMP1P23763 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
VAMP1P23763 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.95□□□□□ -0.18
VAMP1P23763 AC097637.2-201ENST00000624096 1997 ntBASIC13.95□□□□□ -0.18
VAMP1P23763 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VAMP1P23763 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
VAMP1P23763 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VAMP1P23763 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VAMP1P23763 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VAMP1P23763 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC13.95□□□□□ -0.18
VAMP1P23763 SPDYE15P-201ENST00000424157 909 ntBASIC13.95□□□□□ -0.18
VAMP1P23763 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VAMP1P23763 NKTR-203ENST00000442970 646 ntTSL 2 BASIC13.95□□□□□ -0.18
VAMP1P23763 GCSHP5-201ENST00000443090 522 ntBASIC13.95□□□□□ -0.18
VAMP1P23763 SRP19-202ENST00000445150 833 ntTSL 2 BASIC13.95□□□□□ -0.18
VAMP1P23763 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VAMP1P23763 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
VAMP1P23763 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.95□□□□□ -0.18
VAMP1P23763 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC13.95□□□□□ -0.18
VAMP1P23763 AC005332.3-201ENST00000589904 676 ntBASIC13.95□□□□□ -0.18
VAMP1P23763 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC13.95□□□□□ -0.18
VAMP1P23763 AL139011.1-202ENST00000642063 584 ntBASIC13.95□□□□□ -0.18
VAMP1P23763 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC13.95□□□□□ -0.18
VAMP1P23763 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
VAMP1P23763 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.95□□□□□ -0.18
VAMP1P23763 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.95□□□□□ -0.18
VAMP1P23763 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
VAMP1P23763 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
VAMP1P23763 PPT1-215ENST00000641471 2368 ntBASIC13.95□□□□□ -0.18
VAMP1P23763 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VAMP1P23763 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VAMP1P23763 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
VAMP1P23763 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
VAMP1P23763 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
VAMP1P23763 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
VAMP1P23763 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VAMP1P23763 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.95□□□□□ -0.18
VAMP1P23763 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
VAMP1P23763 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VAMP1P23763 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
VAMP1P23763 AC067750.1-201ENST00000608826 6545 ntBASIC13.94□□□□□ -0.18
VAMP1P23763 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
VAMP1P23763 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.94□□□□□ -0.18
VAMP1P23763 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.94□□□□□ -0.18
VAMP1P23763 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VAMP1P23763 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
VAMP1P23763 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VAMP1P23763 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms