Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
XRCC1P18887 HMGA1P7-201ENST00000406908 502 ntBASIC16.44■□□□□ 0.22
XRCC1P18887 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.44■□□□□ 0.22
XRCC1P18887 AC254562.1-201ENST00000417586 456 ntBASIC16.44■□□□□ 0.22
XRCC1P18887 HCG4-201ENST00000418983 998 ntBASIC16.44■□□□□ 0.22
XRCC1P18887 RPS8P6-201ENST00000426177 609 ntBASIC16.44■□□□□ 0.22
XRCC1P18887 DNAJB3-202ENST00000449667 1266 ntBASIC16.44■□□□□ 0.22
XRCC1P18887 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.44■□□□□ 0.22
XRCC1P18887 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.44■□□□□ 0.22
XRCC1P18887 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.44■□□□□ 0.22
XRCC1P18887 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.44■□□□□ 0.22
XRCC1P18887 AC092902.6-201ENST00000641783 218 ntBASIC16.44■□□□□ 0.22
XRCC1P18887 AC092850.2-201ENST00000623821 2697 ntBASIC16.44■□□□□ 0.22
XRCC1P18887 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.44■□□□□ 0.22
XRCC1P18887 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
XRCC1P18887 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
XRCC1P18887 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
XRCC1P18887 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
XRCC1P18887 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
XRCC1P18887 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.44■□□□□ 0.22
XRCC1P18887 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
XRCC1P18887 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
XRCC1P18887 KRT8P49-201ENST00000604166 1432 ntBASIC16.44■□□□□ 0.22
XRCC1P18887 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.44■□□□□ 0.22
XRCC1P18887 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
XRCC1P18887 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
XRCC1P18887 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
XRCC1P18887 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
XRCC1P18887 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
XRCC1P18887 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.43■□□□□ 0.22
XRCC1P18887 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.43■□□□□ 0.22
XRCC1P18887 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
XRCC1P18887 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
XRCC1P18887 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
XRCC1P18887 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
XRCC1P18887 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
XRCC1P18887 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
XRCC1P18887 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
XRCC1P18887 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
XRCC1P18887 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
XRCC1P18887 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.43■□□□□ 0.22
XRCC1P18887 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.43■□□□□ 0.22
XRCC1P18887 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
XRCC1P18887 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
XRCC1P18887 AC002056.1-201ENST00000395613 760 ntBASIC16.43■□□□□ 0.22
XRCC1P18887 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.43■□□□□ 0.22
XRCC1P18887 AC092183.1-201ENST00000469884 875 ntBASIC16.43■□□□□ 0.22
XRCC1P18887 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
XRCC1P18887 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
XRCC1P18887 AC092919.2-201ENST00000623631 1645 ntBASIC16.43■□□□□ 0.22
XRCC1P18887 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.43■□□□□ 0.22
XRCC1P18887 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
XRCC1P18887 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.43■□□□□ 0.22
XRCC1P18887 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
XRCC1P18887 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
XRCC1P18887 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
XRCC1P18887 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
XRCC1P18887 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
XRCC1P18887 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
XRCC1P18887 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
XRCC1P18887 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.43■□□□□ 0.22
XRCC1P18887 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
XRCC1P18887 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
XRCC1P18887 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
XRCC1P18887 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
XRCC1P18887 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
XRCC1P18887 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
XRCC1P18887 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
XRCC1P18887 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
XRCC1P18887 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
XRCC1P18887 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.42■□□□□ 0.22
XRCC1P18887 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.42■□□□□ 0.22
XRCC1P18887 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.42■□□□□ 0.22
XRCC1P18887 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.42■□□□□ 0.22
XRCC1P18887 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
XRCC1P18887 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
XRCC1P18887 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.42■□□□□ 0.22
XRCC1P18887 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
XRCC1P18887 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
XRCC1P18887 ALOX12P2-203ENST00000570921 1945 ntBASIC16.42■□□□□ 0.22
XRCC1P18887 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.42■□□□□ 0.22
XRCC1P18887 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
XRCC1P18887 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.42■□□□□ 0.22
XRCC1P18887 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.42■□□□□ 0.22
XRCC1P18887 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
XRCC1P18887 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
XRCC1P18887 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.42■□□□□ 0.22
XRCC1P18887 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
XRCC1P18887 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.42■□□□□ 0.22
XRCC1P18887 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
XRCC1P18887 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.41■□□□□ 0.22
XRCC1P18887 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
XRCC1P18887 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.41■□□□□ 0.22
XRCC1P18887 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
XRCC1P18887 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
XRCC1P18887 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
XRCC1P18887 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
XRCC1P18887 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
XRCC1P18887 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.41■□□□□ 0.22
XRCC1P18887 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms