Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
TRGV3P03979 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRGV3P03979 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
TRGV3P03979 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
TRGV3P03979 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TRGV3P03979 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRGV3P03979 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRGV3P03979 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC12.97□□□□□ -0.33
TRGV3P03979 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRGV3P03979 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC12.97□□□□□ -0.33
TRGV3P03979 AC067930.6-201ENST00000623257 4947 ntBASIC12.97□□□□□ -0.33
TRGV3P03979 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRGV3P03979 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
TRGV3P03979 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC12.97□□□□□ -0.33
TRGV3P03979 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRGV3P03979 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRGV3P03979 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
TRGV3P03979 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRGV3P03979 AL031731.1-201ENST00000642131 2094 ntBASIC12.97□□□□□ -0.33
TRGV3P03979 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRGV3P03979 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC12.97□□□□□ -0.33
TRGV3P03979 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRGV3P03979 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
TRGV3P03979 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
TRGV3P03979 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRGV3P03979 DPM2-202ENST00000373110 738 ntTSL 2 BASIC12.97□□□□□ -0.33
TRGV3P03979 YBX2P1-201ENST00000394192 760 ntBASIC12.97□□□□□ -0.33
TRGV3P03979 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRGV3P03979 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC12.97□□□□□ -0.33
TRGV3P03979 COX10-202ENST00000429152 875 ntTSL 2 BASIC12.97□□□□□ -0.33
TRGV3P03979 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC12.97□□□□□ -0.33
TRGV3P03979 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRGV3P03979 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC12.97□□□□□ -0.33
TRGV3P03979 AC109635.5-201ENST00000533593 962 ntBASIC12.97□□□□□ -0.33
TRGV3P03979 AP002472.1-201ENST00000577490 586 ntBASIC12.97□□□□□ -0.33
TRGV3P03979 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRGV3P03979 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRGV3P03979 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC12.97□□□□□ -0.33
TRGV3P03979 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRGV3P03979 AL078644.1-201ENST00000609881 752 ntBASIC12.97□□□□□ -0.33
TRGV3P03979 AC091812.2-201ENST00000619081 385 ntBASIC12.97□□□□□ -0.33
TRGV3P03979 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC12.97□□□□□ -0.33
TRGV3P03979 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC12.97□□□□□ -0.33
TRGV3P03979 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
TRGV3P03979 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRGV3P03979 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRGV3P03979 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRGV3P03979 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRGV3P03979 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
TRGV3P03979 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC12.97□□□□□ -0.33
TRGV3P03979 CES3-203ENST00000543856 3178 ntTSL 2 BASIC12.97□□□□□ -0.33
TRGV3P03979 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC12.97□□□□□ -0.33
TRGV3P03979 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRGV3P03979 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
TRGV3P03979 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRGV3P03979 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRGV3P03979 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV3P03979 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC12.96□□□□□ -0.33
TRGV3P03979 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV3P03979 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV3P03979 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV3P03979 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV3P03979 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
TRGV3P03979 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV3P03979 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
TRGV3P03979 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC12.96□□□□□ -0.33
TRGV3P03979 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC12.96□□□□□ -0.33
TRGV3P03979 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC12.96□□□□□ -0.33
TRGV3P03979 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV3P03979 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV3P03979 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC12.96□□□□□ -0.33
TRGV3P03979 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV3P03979 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV3P03979 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC12.96□□□□□ -0.33
TRGV3P03979 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
TRGV3P03979 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC12.96□□□□□ -0.33
TRGV3P03979 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
TRGV3P03979 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC12.96□□□□□ -0.33
TRGV3P03979 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV3P03979 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV3P03979 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV3P03979 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
TRGV3P03979 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV3P03979 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
TRGV3P03979 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV3P03979 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV3P03979 KRT18P34-201ENST00000488218 1270 ntBASIC12.96□□□□□ -0.33
TRGV3P03979 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC12.96□□□□□ -0.33
TRGV3P03979 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
TRGV3P03979 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV3P03979 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.33
TRGV3P03979 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC12.96□□□□□ -0.33
TRGV3P03979 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC12.96□□□□□ -0.33
TRGV3P03979 AC020765.3-201ENST00000613051 740 ntBASIC12.96□□□□□ -0.33
TRGV3P03979 C20orf181-201ENST00000623918 480 ntBASIC12.96□□□□□ -0.33
TRGV3P03979 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
TRGV3P03979 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV3P03979 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRGV3P03979 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
TRGV3P03979 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms