Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 KRT8P39-201ENST00000396270 1433 ntBASIC14.84□□□□□ -0.03
HLA-DQA2P01906 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQA2P01906 GGT3P-204ENST00000453783 1664 ntBASIC14.84□□□□□ -0.03
HLA-DQA2P01906 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQA2P01906 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQA2P01906 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQA2P01906 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQA2P01906 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.84□□□□□ -0.03
HLA-DQA2P01906 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQA2P01906 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQA2P01906 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQA2P01906 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQA2P01906 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQA2P01906 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.84□□□□□ -0.03
HLA-DQA2P01906 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
HLA-DQA2P01906 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQA2P01906 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQA2P01906 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQA2P01906 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQA2P01906 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQA2P01906 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-DQA2P01906 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.84□□□□□ -0.03
HLA-DQA2P01906 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
HLA-DQA2P01906 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQA2P01906 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.84□□□□□ -0.03
HLA-DQA2P01906 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.84□□□□□ -0.03
HLA-DQA2P01906 RPS2P1-201ENST00000434010 821 ntBASIC14.84□□□□□ -0.03
HLA-DQA2P01906 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQA2P01906 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.84□□□□□ -0.03
HLA-DQA2P01906 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-DQA2P01906 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
HLA-DQA2P01906 RPS15P9-201ENST00000494093 319 ntBASIC14.84□□□□□ -0.03
HLA-DQA2P01906 SLC25A6P2-201ENST00000497974 877 ntBASIC14.84□□□□□ -0.03
HLA-DQA2P01906 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.84□□□□□ -0.03
HLA-DQA2P01906 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQA2P01906 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-DQA2P01906 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQA2P01906 CLEC4GP1-201ENST00000596555 870 ntBASIC14.84□□□□□ -0.03
HLA-DQA2P01906 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQA2P01906 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
HLA-DQA2P01906 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-DQA2P01906 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQA2P01906 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQA2P01906 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
HLA-DQA2P01906 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
HLA-DQA2P01906 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-DQA2P01906 HYMAI-201ENST00000635591 3347 ntBASIC14.84□□□□□ -0.03
HLA-DQA2P01906 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
HLA-DQA2P01906 OR2I1P-209ENST00000641730 5365 ntBASIC14.84□□□□□ -0.03
HLA-DQA2P01906 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-DQA2P01906 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.83□□□□□ -0.03
HLA-DQA2P01906 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-DQA2P01906 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-DQA2P01906 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-DQA2P01906 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-DQA2P01906 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-DQA2P01906 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-DQA2P01906 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-DQA2P01906 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
HLA-DQA2P01906 AC132872.4-202ENST00000622924 2756 ntBASIC14.83□□□□□ -0.04
HLA-DQA2P01906 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
HLA-DQA2P01906 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.83□□□□□ -0.04
HLA-DQA2P01906 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
HLA-DQA2P01906 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.83□□□□□ -0.04
HLA-DQA2P01906 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DQA2P01906 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
HLA-DQA2P01906 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DQA2P01906 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DQA2P01906 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.83□□□□□ -0.04
HLA-DQA2P01906 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DQA2P01906 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.83□□□□□ -0.04
HLA-DQA2P01906 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.83□□□□□ -0.04
HLA-DQA2P01906 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.83□□□□□ -0.04
HLA-DQA2P01906 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.83□□□□□ -0.04
HLA-DQA2P01906 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.83□□□□□ -0.04
HLA-DQA2P01906 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.83□□□□□ -0.04
HLA-DQA2P01906 REXO1L3P-201ENST00000622202 1288 ntBASIC14.83□□□□□ -0.04
HLA-DQA2P01906 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
HLA-DQA2P01906 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DQA2P01906 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DQA2P01906 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
HLA-DQA2P01906 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DQA2P01906 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
HLA-DQA2P01906 PAUPAR-201ENST00000630360 2965 ntBASIC14.83□□□□□ -0.04
HLA-DQA2P01906 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
HLA-DQA2P01906 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DQA2P01906 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.83□□□□□ -0.04
HLA-DQA2P01906 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
HLA-DQA2P01906 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.83□□□□□ -0.04
HLA-DQA2P01906 AL512652.2-201ENST00000625156 1716 ntBASIC14.83□□□□□ -0.04
HLA-DQA2P01906 AL031731.1-201ENST00000642131 2094 ntBASIC14.83□□□□□ -0.04
HLA-DQA2P01906 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
HLA-DQA2P01906 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DQA2P01906 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.83□□□□□ -0.04
HLA-DQA2P01906 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
HLA-DQA2P01906 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.83□□□□□ -0.04
HLA-DQA2P01906 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DQA2P01906 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.83□□□□□ -0.04
HLA-DQA2P01906 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.82□□□□□ -0.04
HLA-DQA2P01906 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms