Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MBD3O95983 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
MBD3O95983 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
MBD3O95983 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MBD3O95983 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
MBD3O95983 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
MBD3O95983 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
MBD3O95983 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
MBD3O95983 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MBD3O95983 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MBD3O95983 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MBD3O95983 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MBD3O95983 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
MBD3O95983 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MBD3O95983 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MBD3O95983 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MBD3O95983 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
MBD3O95983 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MBD3O95983 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.89■□□□□ 0.61
MBD3O95983 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MBD3O95983 ABCD1P5-201ENST00000445663 754 ntBASIC18.89■□□□□ 0.61
MBD3O95983 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MBD3O95983 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.89■□□□□ 0.61
MBD3O95983 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
MBD3O95983 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MBD3O95983 AL121672.3-201ENST00000608644 468 ntBASIC18.89■□□□□ 0.61
MBD3O95983 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MBD3O95983 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MBD3O95983 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
MBD3O95983 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MBD3O95983 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MBD3O95983 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MBD3O95983 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MBD3O95983 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
MBD3O95983 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.89■□□□□ 0.61
MBD3O95983 NSUN5P1-202ENST00000421140 1535 ntBASIC18.89■□□□□ 0.61
MBD3O95983 NSUN5P2-203ENST00000457352 1529 ntBASIC18.89■□□□□ 0.61
MBD3O95983 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC18.89■□□□□ 0.61
MBD3O95983 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MBD3O95983 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MBD3O95983 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MBD3O95983 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC18.89■□□□□ 0.61
MBD3O95983 AP002414.2-201ENST00000591780 3365 ntBASIC18.89■□□□□ 0.61
MBD3O95983 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
MBD3O95983 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MBD3O95983 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MBD3O95983 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
MBD3O95983 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.88■□□□□ 0.61
MBD3O95983 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
MBD3O95983 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.88■□□□□ 0.61
MBD3O95983 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MBD3O95983 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MBD3O95983 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
MBD3O95983 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC18.88■□□□□ 0.61
MBD3O95983 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MBD3O95983 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MBD3O95983 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
MBD3O95983 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
MBD3O95983 AL596275.1-201ENST00000423464 877 ntBASIC18.88■□□□□ 0.61
MBD3O95983 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.88■□□□□ 0.61
MBD3O95983 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.88■□□□□ 0.61
MBD3O95983 PRYP5-201ENST00000451909 266 ntBASIC18.88■□□□□ 0.61
MBD3O95983 BX276092.5-203ENST00000456199 560 ntBASIC18.88■□□□□ 0.61
MBD3O95983 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.88■□□□□ 0.61
MBD3O95983 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.88■□□□□ 0.61
MBD3O95983 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
MBD3O95983 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.88■□□□□ 0.61
MBD3O95983 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.88■□□□□ 0.61
MBD3O95983 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.88■□□□□ 0.61
MBD3O95983 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
MBD3O95983 AC133561.5-201ENST00000635547 218 ntBASIC18.88■□□□□ 0.61
MBD3O95983 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MBD3O95983 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
MBD3O95983 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
MBD3O95983 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MBD3O95983 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MBD3O95983 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MBD3O95983 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MBD3O95983 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MBD3O95983 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MBD3O95983 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
MBD3O95983 POLL-217ENST00000628479 1953 ntTSL 5 BASIC18.88■□□□□ 0.61
MBD3O95983 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MBD3O95983 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MBD3O95983 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MBD3O95983 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.88■□□□□ 0.61
MBD3O95983 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
MBD3O95983 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MBD3O95983 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
MBD3O95983 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MBD3O95983 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
MBD3O95983 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MBD3O95983 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
MBD3O95983 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.87■□□□□ 0.61
MBD3O95983 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
MBD3O95983 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
MBD3O95983 KRT17P6-201ENST00000453795 1220 ntBASIC18.87■□□□□ 0.61
MBD3O95983 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC18.87■□□□□ 0.61
MBD3O95983 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MBD3O95983 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms