Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE6O95741 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.17■□□□□ 0.18
CPNE6O95741 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE6O95741 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE6O95741 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE6O95741 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE6O95741 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE6O95741 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE6O95741 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE6O95741 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE6O95741 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE6O95741 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE6O95741 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.17■□□□□ 0.18
CPNE6O95741 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CPNE6O95741 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
CPNE6O95741 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE6O95741 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE6O95741 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.16■□□□□ 0.18
CPNE6O95741 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.16■□□□□ 0.18
CPNE6O95741 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE6O95741 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.16■□□□□ 0.18
CPNE6O95741 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE6O95741 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE6O95741 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE6O95741 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE6O95741 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE6O95741 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE6O95741 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CPNE6O95741 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE6O95741 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE6O95741 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
CPNE6O95741 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE6O95741 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE6O95741 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE6O95741 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE6O95741 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE6O95741 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE6O95741 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE6O95741 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE6O95741 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
CPNE6O95741 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE6O95741 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CPNE6O95741 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE6O95741 SLC25A1P3-201ENST00000395415 828 ntBASIC16.16■□□□□ 0.18
CPNE6O95741 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE6O95741 GPS2P2-201ENST00000430745 888 ntBASIC16.16■□□□□ 0.18
CPNE6O95741 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.16■□□□□ 0.18
CPNE6O95741 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE6O95741 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.16■□□□□ 0.18
CPNE6O95741 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CPNE6O95741 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.16■□□□□ 0.18
CPNE6O95741 MPDU1-223ENST00000582151 728 ntBASIC16.16■□□□□ 0.18
CPNE6O95741 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.16■□□□□ 0.18
CPNE6O95741 AC084121.4-201ENST00000641598 221 ntBASIC16.16■□□□□ 0.18
CPNE6O95741 AF228730.8-201ENST00000642140 221 ntBASIC16.16■□□□□ 0.18
CPNE6O95741 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE6O95741 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
CPNE6O95741 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.16■□□□□ 0.18
CPNE6O95741 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.16■□□□□ 0.18
CPNE6O95741 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE6O95741 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.16■□□□□ 0.18
CPNE6O95741 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE6O95741 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE6O95741 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE6O95741 TUBB3P1-201ENST00000405796 1332 ntBASIC16.16■□□□□ 0.18
CPNE6O95741 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CPNE6O95741 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.16■□□□□ 0.18
CPNE6O95741 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.15■□□□□ 0.18
CPNE6O95741 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE6O95741 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE6O95741 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.15■□□□□ 0.18
CPNE6O95741 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE6O95741 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CPNE6O95741 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE6O95741 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE6O95741 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE6O95741 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE6O95741 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE6O95741 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE6O95741 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.15■□□□□ 0.18
CPNE6O95741 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE6O95741 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE6O95741 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CPNE6O95741 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CPNE6O95741 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.15■□□□□ 0.18
CPNE6O95741 SPDYE7P-202ENST00000420373 878 ntBASIC16.15■□□□□ 0.18
CPNE6O95741 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.15■□□□□ 0.18
CPNE6O95741 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
CPNE6O95741 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.15■□□□□ 0.18
CPNE6O95741 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
CPNE6O95741 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.15■□□□□ 0.18
CPNE6O95741 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.15■□□□□ 0.18
CPNE6O95741 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE6O95741 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CPNE6O95741 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.15■□□□□ 0.18
CPNE6O95741 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.15■□□□□ 0.18
CPNE6O95741 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CPNE6O95741 DUX4L27-201ENST00000554796 1261 ntBASIC16.15■□□□□ 0.18
CPNE6O95741 AC051619.7-201ENST00000568314 623 ntBASIC16.15■□□□□ 0.18
CPNE6O95741 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms