Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.36□□□□□ -0.11
UPK1BO75841 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UPK1BO75841 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UPK1BO75841 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UPK1BO75841 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.36□□□□□ -0.11
UPK1BO75841 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.36□□□□□ -0.11
UPK1BO75841 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
UPK1BO75841 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UPK1BO75841 AC112693.3-201ENST00000624819 1983 ntBASIC14.36□□□□□ -0.11
UPK1BO75841 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.36□□□□□ -0.11
UPK1BO75841 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UPK1BO75841 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UPK1BO75841 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC14.36□□□□□ -0.11
UPK1BO75841 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.36□□□□□ -0.11
UPK1BO75841 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.36□□□□□ -0.11
UPK1BO75841 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
UPK1BO75841 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
UPK1BO75841 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
UPK1BO75841 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.36□□□□□ -0.11
UPK1BO75841 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
UPK1BO75841 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UPK1BO75841 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.35□□□□□ -0.11
UPK1BO75841 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1BO75841 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1BO75841 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.35□□□□□ -0.11
UPK1BO75841 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
UPK1BO75841 LINC01144-201ENST00000626198 1710 ntBASIC14.35□□□□□ -0.11
UPK1BO75841 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.35□□□□□ -0.11
UPK1BO75841 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1BO75841 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1BO75841 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1BO75841 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.35□□□□□ -0.11
UPK1BO75841 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1BO75841 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
UPK1BO75841 AL049757.1-201ENST00000616842 1596 ntBASIC14.35□□□□□ -0.11
UPK1BO75841 SNX33P1-201ENST00000592116 1762 ntBASIC14.35□□□□□ -0.11
UPK1BO75841 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1BO75841 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1BO75841 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
UPK1BO75841 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC14.35□□□□□ -0.11
UPK1BO75841 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1BO75841 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1BO75841 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1BO75841 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1BO75841 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
UPK1BO75841 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC14.35□□□□□ -0.11
UPK1BO75841 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC14.35□□□□□ -0.11
UPK1BO75841 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC14.35□□□□□ -0.11
UPK1BO75841 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
UPK1BO75841 TSPY6P-201ENST00000448518 926 ntBASIC14.35□□□□□ -0.11
UPK1BO75841 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1BO75841 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
UPK1BO75841 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1BO75841 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC14.35□□□□□ -0.11
UPK1BO75841 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1BO75841 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC14.35□□□□□ -0.11
UPK1BO75841 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.35□□□□□ -0.11
UPK1BO75841 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1BO75841 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC14.35□□□□□ -0.11
UPK1BO75841 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1BO75841 PFKL-212ENST00000628044 129 ntTSL 3 BASIC14.35□□□□□ -0.11
UPK1BO75841 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
UPK1BO75841 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1BO75841 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1BO75841 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1BO75841 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1BO75841 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.35□□□□□ -0.11
UPK1BO75841 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
UPK1BO75841 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1BO75841 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1BO75841 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
UPK1BO75841 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1BO75841 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1BO75841 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
UPK1BO75841 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1BO75841 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1BO75841 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.35□□□□□ -0.11
UPK1BO75841 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1BO75841 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
UPK1BO75841 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
UPK1BO75841 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1BO75841 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UPK1BO75841 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK1BO75841 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.34□□□□□ -0.11
UPK1BO75841 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK1BO75841 AC148477.4-201ENST00000613430 1793 ntBASIC14.34□□□□□ -0.11
UPK1BO75841 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.34□□□□□ -0.11
UPK1BO75841 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK1BO75841 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK1BO75841 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK1BO75841 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.34□□□□□ -0.11
UPK1BO75841 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK1BO75841 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK1BO75841 PCGF3-213ENST00000620529 1899 ntBASIC14.34□□□□□ -0.11
UPK1BO75841 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UPK1BO75841 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.34□□□□□ -0.11
UPK1BO75841 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.34□□□□□ -0.11
UPK1BO75841 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK1BO75841 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC14.34□□□□□ -0.11
UPK1BO75841 MIR638-201ENST00000385237 100 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms