Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.75□□□□□ -0.05
ZIC3O60481 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.75□□□□□ -0.05
ZIC3O60481 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.75□□□□□ -0.05
ZIC3O60481 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZIC3O60481 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
ZIC3O60481 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ZIC3O60481 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.75□□□□□ -0.05
ZIC3O60481 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
ZIC3O60481 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.75□□□□□ -0.05
ZIC3O60481 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZIC3O60481 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
ZIC3O60481 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
ZIC3O60481 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.75□□□□□ -0.05
ZIC3O60481 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.75□□□□□ -0.05
ZIC3O60481 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ZIC3O60481 FAM86GP-201ENST00000448322 971 ntBASIC14.75□□□□□ -0.05
ZIC3O60481 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
ZIC3O60481 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
ZIC3O60481 AC024267.1-201ENST00000582320 895 ntBASIC14.75□□□□□ -0.05
ZIC3O60481 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZIC3O60481 AC003101.2-201ENST00000612557 442 ntBASIC14.75□□□□□ -0.05
ZIC3O60481 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.75□□□□□ -0.05
ZIC3O60481 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ZIC3O60481 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.75□□□□□ -0.05
ZIC3O60481 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZIC3O60481 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ZIC3O60481 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.75□□□□□ -0.05
ZIC3O60481 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
ZIC3O60481 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZIC3O60481 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZIC3O60481 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ZIC3O60481 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZIC3O60481 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.75□□□□□ -0.05
ZIC3O60481 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ZIC3O60481 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.75□□□□□ -0.05
ZIC3O60481 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.75□□□□□ -0.05
ZIC3O60481 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
ZIC3O60481 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.75□□□□□ -0.05
ZIC3O60481 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
ZIC3O60481 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
ZIC3O60481 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.75□□□□□ -0.05
ZIC3O60481 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZIC3O60481 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ZIC3O60481 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.74□□□□□ -0.05
ZIC3O60481 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
ZIC3O60481 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZIC3O60481 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.74□□□□□ -0.05
ZIC3O60481 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
ZIC3O60481 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ZIC3O60481 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZIC3O60481 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZIC3O60481 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZIC3O60481 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.74□□□□□ -0.05
ZIC3O60481 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZIC3O60481 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ZIC3O60481 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ZIC3O60481 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ZIC3O60481 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ZIC3O60481 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
ZIC3O60481 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.74□□□□□ -0.05
ZIC3O60481 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.74□□□□□ -0.05
ZIC3O60481 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.74□□□□□ -0.05
ZIC3O60481 CYMP-203ENST00000474680 1263 ntBASIC14.74□□□□□ -0.05
ZIC3O60481 AC067863.1-201ENST00000494933 530 ntBASIC14.74□□□□□ -0.05
ZIC3O60481 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.74□□□□□ -0.05
ZIC3O60481 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.74□□□□□ -0.05
ZIC3O60481 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.74□□□□□ -0.05
ZIC3O60481 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.74□□□□□ -0.05
ZIC3O60481 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.74□□□□□ -0.05
ZIC3O60481 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
ZIC3O60481 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZIC3O60481 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZIC3O60481 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ZIC3O60481 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZIC3O60481 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ZIC3O60481 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.74□□□□□ -0.05
ZIC3O60481 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
ZIC3O60481 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZIC3O60481 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZIC3O60481 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
ZIC3O60481 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
ZIC3O60481 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.74□□□□□ -0.05
ZIC3O60481 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZIC3O60481 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
ZIC3O60481 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
ZIC3O60481 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.73□□□□□ -0.05
ZIC3O60481 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
ZIC3O60481 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ZIC3O60481 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.73□□□□□ -0.05
ZIC3O60481 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.73□□□□□ -0.05
ZIC3O60481 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
ZIC3O60481 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.73□□□□□ -0.05
ZIC3O60481 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZIC3O60481 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.73□□□□□ -0.05
ZIC3O60481 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
ZIC3O60481 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZIC3O60481 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
ZIC3O60481 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
ZIC3O60481 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ZIC3O60481 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms