Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
FOXS1O43638 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
FOXS1O43638 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
FOXS1O43638 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.41■□□□□ 0.06
FOXS1O43638 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.41■□□□□ 0.06
FOXS1O43638 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.41■□□□□ 0.06
FOXS1O43638 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.41■□□□□ 0.06
FOXS1O43638 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
FOXS1O43638 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXS1O43638 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXS1O43638 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
FOXS1O43638 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXS1O43638 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.4■□□□□ 0.06
FOXS1O43638 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.4■□□□□ 0.06
FOXS1O43638 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FOXS1O43638 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
FOXS1O43638 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
FOXS1O43638 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.4■□□□□ 0.06
FOXS1O43638 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXS1O43638 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FOXS1O43638 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
FOXS1O43638 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.4■□□□□ 0.06
FOXS1O43638 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXS1O43638 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
FOXS1O43638 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
FOXS1O43638 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.4■□□□□ 0.06
FOXS1O43638 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXS1O43638 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.4■□□□□ 0.06
FOXS1O43638 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.4■□□□□ 0.06
FOXS1O43638 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
FOXS1O43638 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.4■□□□□ 0.06
FOXS1O43638 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.4■□□□□ 0.06
FOXS1O43638 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FOXS1O43638 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.4■□□□□ 0.06
FOXS1O43638 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXS1O43638 MIR4321-201ENST00000592276 80 ntBASIC15.4■□□□□ 0.06
FOXS1O43638 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.4■□□□□ 0.06
FOXS1O43638 AL390955.2-201ENST00000603032 514 ntBASIC15.4■□□□□ 0.06
FOXS1O43638 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FOXS1O43638 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.4■□□□□ 0.06
FOXS1O43638 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.4■□□□□ 0.06
FOXS1O43638 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FOXS1O43638 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXS1O43638 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
FOXS1O43638 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.4■□□□□ 0.06
FOXS1O43638 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.4■□□□□ 0.06
FOXS1O43638 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
FOXS1O43638 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXS1O43638 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.4■□□□□ 0.06
FOXS1O43638 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FOXS1O43638 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FOXS1O43638 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXS1O43638 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FOXS1O43638 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
FOXS1O43638 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.39■□□□□ 0.05
FOXS1O43638 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
FOXS1O43638 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXS1O43638 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
FOXS1O43638 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.39■□□□□ 0.05
FOXS1O43638 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXS1O43638 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.39■□□□□ 0.05
FOXS1O43638 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.39■□□□□ 0.05
FOXS1O43638 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
FOXS1O43638 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXS1O43638 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXS1O43638 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.39■□□□□ 0.05
FOXS1O43638 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
FOXS1O43638 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
FOXS1O43638 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
FOXS1O43638 AL353705.2-201ENST00000428243 662 ntBASIC15.39■□□□□ 0.05
FOXS1O43638 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.39■□□□□ 0.05
FOXS1O43638 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
FOXS1O43638 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.39■□□□□ 0.05
FOXS1O43638 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.39■□□□□ 0.05
FOXS1O43638 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.39■□□□□ 0.05
FOXS1O43638 AC105021.1-202ENST00000570572 669 ntBASIC15.39■□□□□ 0.05
FOXS1O43638 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXS1O43638 AC005498.2-205ENST00000593218 784 ntBASIC15.39■□□□□ 0.05
FOXS1O43638 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
FOXS1O43638 AL365330.1-201ENST00000607459 531 ntBASIC15.39■□□□□ 0.05
FOXS1O43638 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
FOXS1O43638 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
FOXS1O43638 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
FOXS1O43638 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXS1O43638 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.39■□□□□ 0.05
FOXS1O43638 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.39■□□□□ 0.05
FOXS1O43638 AC079328.2-201ENST00000561241 3354 ntBASIC15.39■□□□□ 0.05
FOXS1O43638 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
FOXS1O43638 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
FOXS1O43638 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
FOXS1O43638 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXS1O43638 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXS1O43638 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXS1O43638 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXS1O43638 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.38■□□□□ 0.05
FOXS1O43638 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
FOXS1O43638 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
FOXS1O43638 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FOXS1O43638 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.38■□□□□ 0.05
FOXS1O43638 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms