Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RIPK2O43353 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RIPK2O43353 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RIPK2O43353 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RIPK2O43353 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RIPK2O43353 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RIPK2O43353 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
RIPK2O43353 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RIPK2O43353 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RIPK2O43353 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.73■□□□□ 0.27
RIPK2O43353 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.73■□□□□ 0.27
RIPK2O43353 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.73■□□□□ 0.27
RIPK2O43353 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.73■□□□□ 0.27
RIPK2O43353 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.73■□□□□ 0.27
RIPK2O43353 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.73■□□□□ 0.27
RIPK2O43353 LINC01023-201ENST00000606054 436 ntBASIC16.73■□□□□ 0.27
RIPK2O43353 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RIPK2O43353 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.73■□□□□ 0.27
RIPK2O43353 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RIPK2O43353 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
RIPK2O43353 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.73■□□□□ 0.27
RIPK2O43353 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RIPK2O43353 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RIPK2O43353 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.73■□□□□ 0.27
RIPK2O43353 AC005622.1-201ENST00000636801 1703 ntBASIC16.73■□□□□ 0.27
RIPK2O43353 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RIPK2O43353 AP003680.1-201ENST00000598970 3660 ntBASIC16.73■□□□□ 0.27
RIPK2O43353 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RIPK2O43353 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
RIPK2O43353 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.73■□□□□ 0.27
RIPK2O43353 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RIPK2O43353 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RIPK2O43353 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
RIPK2O43353 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RIPK2O43353 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.72■□□□□ 0.27
RIPK2O43353 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RIPK2O43353 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RIPK2O43353 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RIPK2O43353 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RIPK2O43353 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RIPK2O43353 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RIPK2O43353 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.72■□□□□ 0.27
RIPK2O43353 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.72■□□□□ 0.27
RIPK2O43353 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RIPK2O43353 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
RIPK2O43353 NUS1P2-201ENST00000417358 873 ntBASIC16.72■□□□□ 0.27
RIPK2O43353 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.72■□□□□ 0.27
RIPK2O43353 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.72■□□□□ 0.27
RIPK2O43353 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RIPK2O43353 AC107918.2-201ENST00000530817 355 ntBASIC16.72■□□□□ 0.27
RIPK2O43353 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
RIPK2O43353 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RIPK2O43353 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.72■□□□□ 0.27
RIPK2O43353 AC087641.1-201ENST00000557561 1021 ntBASIC16.72■□□□□ 0.27
RIPK2O43353 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.72■□□□□ 0.27
RIPK2O43353 MIR3180-1-201ENST00000580374 94 ntBASIC16.72■□□□□ 0.27
RIPK2O43353 MIR3180-3-201ENST00000584616 94 ntBASIC16.72■□□□□ 0.27
RIPK2O43353 NKAPP1-205ENST00000585790 367 ntBASIC16.72■□□□□ 0.27
RIPK2O43353 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RIPK2O43353 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.72■□□□□ 0.27
RIPK2O43353 AC099336.1-202ENST00000602961 463 ntBASIC16.72■□□□□ 0.27
RIPK2O43353 AL591684.3-201ENST00000605187 298 ntBASIC16.72■□□□□ 0.27
RIPK2O43353 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RIPK2O43353 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.72■□□□□ 0.27
RIPK2O43353 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RIPK2O43353 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RIPK2O43353 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RIPK2O43353 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RIPK2O43353 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.72■□□□□ 0.27
RIPK2O43353 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RIPK2O43353 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.72■□□□□ 0.27
RIPK2O43353 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.72■□□□□ 0.27
RIPK2O43353 AC008677.1-201ENST00000519230 1561 ntBASIC16.72■□□□□ 0.27
RIPK2O43353 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RIPK2O43353 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RIPK2O43353 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RIPK2O43353 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
RIPK2O43353 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
RIPK2O43353 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.71■□□□□ 0.27
RIPK2O43353 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.71■□□□□ 0.27
RIPK2O43353 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RIPK2O43353 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RIPK2O43353 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RIPK2O43353 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
RIPK2O43353 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
RIPK2O43353 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
RIPK2O43353 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RIPK2O43353 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
RIPK2O43353 PI4KAP1-204ENST00000612579 1703 ntBASIC16.71■□□□□ 0.27
RIPK2O43353 TMBIM7P-203ENST00000641617 1718 ntBASIC16.71■□□□□ 0.27
RIPK2O43353 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.71■□□□□ 0.27
RIPK2O43353 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RIPK2O43353 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RIPK2O43353 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RIPK2O43353 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.71■□□□□ 0.27
RIPK2O43353 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.71■□□□□ 0.27
RIPK2O43353 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RIPK2O43353 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RIPK2O43353 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RIPK2O43353 PTCHD3P3-201ENST00000403073 906 ntBASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms