Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 AL607033.1-201ENST00000623900 1599 ntBASIC16.94■□□□□ 0.3
TRANK1O15050 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRANK1O15050 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRANK1O15050 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.94■□□□□ 0.3
TRANK1O15050 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC16.94■□□□□ 0.3
TRANK1O15050 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC16.94■□□□□ 0.3
TRANK1O15050 SCARNA20.5-201ENST00000516991 142 ntBASIC16.94■□□□□ 0.3
TRANK1O15050 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.94■□□□□ 0.3
TRANK1O15050 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TRANK1O15050 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.94■□□□□ 0.3
TRANK1O15050 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TRANK1O15050 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC16.94■□□□□ 0.3
TRANK1O15050 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
TRANK1O15050 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TRANK1O15050 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.94■□□□□ 0.3
TRANK1O15050 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRANK1O15050 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TRANK1O15050 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRANK1O15050 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC16.93■□□□□ 0.3
TRANK1O15050 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRANK1O15050 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC16.93■□□□□ 0.3
TRANK1O15050 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.93■□□□□ 0.3
TRANK1O15050 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.93■□□□□ 0.3
TRANK1O15050 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRANK1O15050 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRANK1O15050 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRANK1O15050 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.93■□□□□ 0.3
TRANK1O15050 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.93■□□□□ 0.3
TRANK1O15050 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRANK1O15050 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRANK1O15050 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.93■□□□□ 0.3
TRANK1O15050 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TRANK1O15050 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRANK1O15050 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TRANK1O15050 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.93■□□□□ 0.3
TRANK1O15050 FO393414.2-201ENST00000405153 598 ntBASIC16.93■□□□□ 0.3
TRANK1O15050 AC012441.1-201ENST00000446669 685 ntBASIC16.93■□□□□ 0.3
TRANK1O15050 AC104306.2-201ENST00000451877 341 ntBASIC16.93■□□□□ 0.3
TRANK1O15050 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC16.93■□□□□ 0.3
TRANK1O15050 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.93■□□□□ 0.3
TRANK1O15050 AL359711.2-201ENST00000563105 872 ntBASIC16.93■□□□□ 0.3
TRANK1O15050 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.93■□□□□ 0.3
TRANK1O15050 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.93■□□□□ 0.3
TRANK1O15050 NEFHP1-201ENST00000412845 2629 ntBASIC16.93■□□□□ 0.3
TRANK1O15050 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
TRANK1O15050 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.93■□□□□ 0.3
TRANK1O15050 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRANK1O15050 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TRANK1O15050 EIF4HP1-201ENST00000453115 687 ntBASIC16.93■□□□□ 0.3
TRANK1O15050 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.93■□□□□ 0.3
TRANK1O15050 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
TRANK1O15050 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.93■□□□□ 0.3
TRANK1O15050 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRANK1O15050 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRANK1O15050 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRANK1O15050 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.92■□□□□ 0.3
TRANK1O15050 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.92■□□□□ 0.3
TRANK1O15050 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRANK1O15050 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRANK1O15050 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRANK1O15050 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
TRANK1O15050 AL662890.1-201ENST00000396818 632 ntBASIC16.92■□□□□ 0.3
TRANK1O15050 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRANK1O15050 AC104596.2-201ENST00000512793 793 ntBASIC16.92■□□□□ 0.3
TRANK1O15050 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.92■□□□□ 0.3
TRANK1O15050 AC025279.2-201ENST00000569730 653 ntBASIC16.92■□□□□ 0.3
TRANK1O15050 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.92■□□□□ 0.3
TRANK1O15050 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRANK1O15050 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRANK1O15050 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
TRANK1O15050 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRANK1O15050 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.92■□□□□ 0.3
TRANK1O15050 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRANK1O15050 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRANK1O15050 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRANK1O15050 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
TRANK1O15050 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRANK1O15050 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRANK1O15050 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRANK1O15050 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRANK1O15050 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRANK1O15050 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRANK1O15050 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRANK1O15050 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRANK1O15050 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TRANK1O15050 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TRANK1O15050 SLC25A24P2-201ENST00000415059 510 ntBASIC16.91■□□□□ 0.3
TRANK1O15050 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRANK1O15050 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TRANK1O15050 MTX1P1-201ENST00000440904 838 ntBASIC16.91■□□□□ 0.3
TRANK1O15050 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.91■□□□□ 0.3
TRANK1O15050 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRANK1O15050 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.91■□□□□ 0.3
TRANK1O15050 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.91■□□□□ 0.3
TRANK1O15050 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRANK1O15050 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.91■□□□□ 0.3
TRANK1O15050 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRANK1O15050 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.91■□□□□ 0.3
TRANK1O15050 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRANK1O15050 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms