Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AL589182.2-201ENST00000619332 1049 ntBASIC14.06□□□□□ -0.16
SDCBPO00560 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SDCBPO00560 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
SDCBPO00560 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SDCBPO00560 GGT4P-201ENST00000623672 1708 ntBASIC14.06□□□□□ -0.16
SDCBPO00560 AC104640.1-201ENST00000562617 2109 ntBASIC14.06□□□□□ -0.16
SDCBPO00560 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.06□□□□□ -0.16
SDCBPO00560 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SDCBPO00560 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SDCBPO00560 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SDCBPO00560 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SDCBPO00560 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.06□□□□□ -0.16
SDCBPO00560 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SDCBPO00560 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SDCBPO00560 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SDCBPO00560 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SDCBPO00560 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SDCBPO00560 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SDCBPO00560 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SDCBPO00560 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SDCBPO00560 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SDCBPO00560 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.06□□□□□ -0.16
SDCBPO00560 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SDCBPO00560 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SDCBPO00560 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SDCBPO00560 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SDCBPO00560 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SDCBPO00560 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
SDCBPO00560 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SDCBPO00560 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
SDCBPO00560 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SDCBPO00560 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SDCBPO00560 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SDCBPO00560 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SDCBPO00560 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SDCBPO00560 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SDCBPO00560 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.05□□□□□ -0.16
SDCBPO00560 AC006449.6-201ENST00000612330 2296 ntBASIC14.05□□□□□ -0.16
SDCBPO00560 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SDCBPO00560 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SDCBPO00560 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SDCBPO00560 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SDCBPO00560 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SDCBPO00560 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.05□□□□□ -0.16
SDCBPO00560 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.05□□□□□ -0.16
SDCBPO00560 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.05□□□□□ -0.16
SDCBPO00560 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
SDCBPO00560 SAPCD2P3-201ENST00000455031 850 ntBASIC14.05□□□□□ -0.16
SDCBPO00560 FGFR3P6-201ENST00000457012 610 ntBASIC14.05□□□□□ -0.16
SDCBPO00560 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.05□□□□□ -0.16
SDCBPO00560 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.05□□□□□ -0.16
SDCBPO00560 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.05□□□□□ -0.16
SDCBPO00560 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.05□□□□□ -0.16
SDCBPO00560 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.05□□□□□ -0.16
SDCBPO00560 AC139887.3-201ENST00000568585 713 ntBASIC14.05□□□□□ -0.16
SDCBPO00560 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.05□□□□□ -0.16
SDCBPO00560 MTDHP4-201ENST00000600287 670 ntBASIC14.05□□□□□ -0.16
SDCBPO00560 AC013467.2-201ENST00000605472 835 ntBASIC14.05□□□□□ -0.16
SDCBPO00560 REXO1L6P-202ENST00000619970 1078 ntBASIC14.05□□□□□ -0.16
SDCBPO00560 AC012313.10-201ENST00000623509 926 ntBASIC14.05□□□□□ -0.16
SDCBPO00560 AL139011.1-202ENST00000642063 584 ntBASIC14.05□□□□□ -0.16
SDCBPO00560 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.05□□□□□ -0.16
SDCBPO00560 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SDCBPO00560 AL590787.1-201ENST00000568856 1315 ntBASIC14.05□□□□□ -0.16
SDCBPO00560 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.05□□□□□ -0.16
SDCBPO00560 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SDCBPO00560 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SDCBPO00560 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SDCBPO00560 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SDCBPO00560 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SDCBPO00560 AC243591.1-201ENST00000452967 1364 ntBASIC14.05□□□□□ -0.16
SDCBPO00560 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SDCBPO00560 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SDCBPO00560 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.05□□□□□ -0.16
SDCBPO00560 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SDCBPO00560 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SDCBPO00560 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SDCBPO00560 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.05□□□□□ -0.16
SDCBPO00560 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.05□□□□□ -0.16
SDCBPO00560 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.04□□□□□ -0.16
SDCBPO00560 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SDCBPO00560 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SDCBPO00560 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
SDCBPO00560 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SDCBPO00560 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.04□□□□□ -0.16
SDCBPO00560 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SDCBPO00560 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SDCBPO00560 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.04□□□□□ -0.16
SDCBPO00560 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SDCBPO00560 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.04□□□□□ -0.16
SDCBPO00560 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SDCBPO00560 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.04□□□□□ -0.16
SDCBPO00560 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
SDCBPO00560 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SDCBPO00560 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SDCBPO00560 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.04□□□□□ -0.16
SDCBPO00560 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.04□□□□□ -0.16
SDCBPO00560 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SDCBPO00560 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
SDCBPO00560 KRT18P56-201ENST00000507275 550 ntBASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms