Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.33■□□□□ 0.21
TBC1D3FA6NER0 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
TBC1D3FA6NER0 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
TBC1D3FA6NER0 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TBC1D3FA6NER0 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TBC1D3FA6NER0 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TBC1D3FA6NER0 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TBC1D3FA6NER0 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
TBC1D3FA6NER0 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.33■□□□□ 0.2
TBC1D3FA6NER0 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
TBC1D3FA6NER0 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TBC1D3FA6NER0 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.33■□□□□ 0.2
TBC1D3FA6NER0 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.33■□□□□ 0.2
TBC1D3FA6NER0 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.33■□□□□ 0.2
TBC1D3FA6NER0 RPL37AP1-201ENST00000412502 279 ntBASIC16.33■□□□□ 0.2
TBC1D3FA6NER0 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TBC1D3FA6NER0 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.33■□□□□ 0.2
TBC1D3FA6NER0 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.33■□□□□ 0.2
TBC1D3FA6NER0 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.33■□□□□ 0.2
TBC1D3FA6NER0 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.33■□□□□ 0.2
TBC1D3FA6NER0 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
TBC1D3FA6NER0 AC009118.2-201ENST00000613275 655 ntBASIC16.33■□□□□ 0.2
TBC1D3FA6NER0 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.33■□□□□ 0.2
TBC1D3FA6NER0 TEX28P1-201ENST00000613479 1221 ntBASIC16.33■□□□□ 0.2
TBC1D3FA6NER0 TEX28P2-201ENST00000617764 1221 ntBASIC16.33■□□□□ 0.2
TBC1D3FA6NER0 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
TBC1D3FA6NER0 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TBC1D3FA6NER0 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TBC1D3FA6NER0 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.33■□□□□ 0.2
TBC1D3FA6NER0 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TBC1D3FA6NER0 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.33■□□□□ 0.2
TBC1D3FA6NER0 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TBC1D3FA6NER0 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TBC1D3FA6NER0 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TBC1D3FA6NER0 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TBC1D3FA6NER0 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
TBC1D3FA6NER0 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TBC1D3FA6NER0 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.33■□□□□ 0.2
TBC1D3FA6NER0 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
TBC1D3FA6NER0 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.33■□□□□ 0.2
TBC1D3FA6NER0 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TBC1D3FA6NER0 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
TBC1D3FA6NER0 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TBC1D3FA6NER0 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
TBC1D3FA6NER0 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TBC1D3FA6NER0 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TBC1D3FA6NER0 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TBC1D3FA6NER0 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TBC1D3FA6NER0 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.32■□□□□ 0.2
TBC1D3FA6NER0 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.32■□□□□ 0.2
TBC1D3FA6NER0 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TBC1D3FA6NER0 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.32■□□□□ 0.2
TBC1D3FA6NER0 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TBC1D3FA6NER0 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.32■□□□□ 0.2
TBC1D3FA6NER0 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TBC1D3FA6NER0 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.32■□□□□ 0.2
TBC1D3FA6NER0 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.32■□□□□ 0.2
TBC1D3FA6NER0 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.32■□□□□ 0.2
TBC1D3FA6NER0 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TBC1D3FA6NER0 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.32■□□□□ 0.2
TBC1D3FA6NER0 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.32■□□□□ 0.2
TBC1D3FA6NER0 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.32■□□□□ 0.2
TBC1D3FA6NER0 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.32■□□□□ 0.2
TBC1D3FA6NER0 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.32■□□□□ 0.2
TBC1D3FA6NER0 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.32■□□□□ 0.2
TBC1D3FA6NER0 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
TBC1D3FA6NER0 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.32■□□□□ 0.2
TBC1D3FA6NER0 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.32■□□□□ 0.2
TBC1D3FA6NER0 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
TBC1D3FA6NER0 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TBC1D3FA6NER0 AC004233.3-201ENST00000607794 1269 ntBASIC16.32■□□□□ 0.2
TBC1D3FA6NER0 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.32■□□□□ 0.2
TBC1D3FA6NER0 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
TBC1D3FA6NER0 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.32■□□□□ 0.2
TBC1D3FA6NER0 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TBC1D3FA6NER0 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TBC1D3FA6NER0 AC012313.1-201ENST00000593393 3059 ntBASIC16.32■□□□□ 0.2
TBC1D3FA6NER0 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TBC1D3FA6NER0 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TBC1D3FA6NER0 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TBC1D3FA6NER0 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TBC1D3FA6NER0 AC105020.1-201ENST00000435356 2205 ntBASIC16.31■□□□□ 0.2
TBC1D3FA6NER0 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TBC1D3FA6NER0 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TBC1D3FA6NER0 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TBC1D3FA6NER0 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TBC1D3FA6NER0 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.31■□□□□ 0.2
TBC1D3FA6NER0 GGT4P-201ENST00000623672 1708 ntBASIC16.31■□□□□ 0.2
TBC1D3FA6NER0 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TBC1D3FA6NER0 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TBC1D3FA6NER0 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.31■□□□□ 0.2
TBC1D3FA6NER0 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.31■□□□□ 0.2
TBC1D3FA6NER0 AC087499.5-201ENST00000452760 1342 ntBASIC16.31■□□□□ 0.2
TBC1D3FA6NER0 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TBC1D3FA6NER0 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TBC1D3FA6NER0 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TBC1D3FA6NER0 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.31■□□□□ 0.2
TBC1D3FA6NER0 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.31■□□□□ 0.2
TBC1D3FA6NER0 HLA-J-202ENST00000469281 1241 ntBASIC16.31■□□□□ 0.2
TBC1D3FA6NER0 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms