Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MBD3L3A6NE82 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.34□□□□□ -0.11
MBD3L3A6NE82 AC104794.3-201ENST00000566840 1248 ntBASIC14.34□□□□□ -0.11
MBD3L3A6NE82 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.34□□□□□ -0.11
MBD3L3A6NE82 AL132655.2-201ENST00000596276 594 ntBASIC14.34□□□□□ -0.11
MBD3L3A6NE82 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.34□□□□□ -0.11
MBD3L3A6NE82 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.34□□□□□ -0.11
MBD3L3A6NE82 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MBD3L3A6NE82 AL592424.1-201ENST00000563624 1536 ntBASIC14.34□□□□□ -0.11
MBD3L3A6NE82 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MBD3L3A6NE82 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
MBD3L3A6NE82 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
MBD3L3A6NE82 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MBD3L3A6NE82 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MBD3L3A6NE82 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.34□□□□□ -0.11
MBD3L3A6NE82 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC14.34□□□□□ -0.11
MBD3L3A6NE82 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MBD3L3A6NE82 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
MBD3L3A6NE82 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
MBD3L3A6NE82 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
MBD3L3A6NE82 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
MBD3L3A6NE82 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
MBD3L3A6NE82 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
MBD3L3A6NE82 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
MBD3L3A6NE82 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
MBD3L3A6NE82 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
MBD3L3A6NE82 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
MBD3L3A6NE82 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
MBD3L3A6NE82 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.33□□□□□ -0.11
MBD3L3A6NE82 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
MBD3L3A6NE82 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.33□□□□□ -0.12
MBD3L3A6NE82 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MBD3L3A6NE82 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
MBD3L3A6NE82 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.33□□□□□ -0.12
MBD3L3A6NE82 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.33□□□□□ -0.12
MBD3L3A6NE82 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
MBD3L3A6NE82 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
MBD3L3A6NE82 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MBD3L3A6NE82 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MBD3L3A6NE82 FO393414.2-201ENST00000405153 598 ntBASIC14.33□□□□□ -0.12
MBD3L3A6NE82 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.33□□□□□ -0.12
MBD3L3A6NE82 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.33□□□□□ -0.12
MBD3L3A6NE82 GAPDHP21-201ENST00000450301 1010 ntBASIC14.33□□□□□ -0.12
MBD3L3A6NE82 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MBD3L3A6NE82 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.33□□□□□ -0.12
MBD3L3A6NE82 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.33□□□□□ -0.12
MBD3L3A6NE82 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
MBD3L3A6NE82 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MBD3L3A6NE82 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MBD3L3A6NE82 CYP4F24P-201ENST00000586049 1580 ntBASIC14.33□□□□□ -0.12
MBD3L3A6NE82 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MBD3L3A6NE82 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.33□□□□□ -0.12
MBD3L3A6NE82 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
MBD3L3A6NE82 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MBD3L3A6NE82 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MBD3L3A6NE82 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
MBD3L3A6NE82 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
MBD3L3A6NE82 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
MBD3L3A6NE82 AL391825.1-201ENST00000457671 1364 ntBASIC14.33□□□□□ -0.12
MBD3L3A6NE82 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.33□□□□□ -0.12
MBD3L3A6NE82 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MBD3L3A6NE82 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MBD3L3A6NE82 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MBD3L3A6NE82 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
MBD3L3A6NE82 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.33□□□□□ -0.12
MBD3L3A6NE82 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
MBD3L3A6NE82 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MBD3L3A6NE82 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
MBD3L3A6NE82 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
MBD3L3A6NE82 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MBD3L3A6NE82 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MBD3L3A6NE82 AC007541.1-201ENST00000570282 1469 ntBASIC14.32□□□□□ -0.12
MBD3L3A6NE82 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
MBD3L3A6NE82 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MBD3L3A6NE82 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.32□□□□□ -0.12
MBD3L3A6NE82 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MBD3L3A6NE82 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
MBD3L3A6NE82 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
MBD3L3A6NE82 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MBD3L3A6NE82 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
MBD3L3A6NE82 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MBD3L3A6NE82 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MBD3L3A6NE82 DFFBP1-201ENST00000433250 979 ntBASIC14.32□□□□□ -0.12
MBD3L3A6NE82 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.32□□□□□ -0.12
MBD3L3A6NE82 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.32□□□□□ -0.12
MBD3L3A6NE82 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.32□□□□□ -0.12
MBD3L3A6NE82 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MBD3L3A6NE82 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
MBD3L3A6NE82 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.32□□□□□ -0.12
MBD3L3A6NE82 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.32□□□□□ -0.12
MBD3L3A6NE82 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.32□□□□□ -0.12
MBD3L3A6NE82 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
MBD3L3A6NE82 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.32□□□□□ -0.12
MBD3L3A6NE82 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.32□□□□□ -0.12
MBD3L3A6NE82 TP53TG3HP-202ENST00000569755 579 ntBASIC14.32□□□□□ -0.12
MBD3L3A6NE82 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.32□□□□□ -0.12
MBD3L3A6NE82 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.32□□□□□ -0.12
MBD3L3A6NE82 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
MBD3L3A6NE82 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MBD3L3A6NE82 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms