Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRAV5A0A0B4J249 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV5A0A0B4J249 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV5A0A0B4J249 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV5A0A0B4J249 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV5A0A0B4J249 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV5A0A0B4J249 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV5A0A0B4J249 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC12.84□□□□□ -0.35
TRAV5A0A0B4J249 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV5A0A0B4J249 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV5A0A0B4J249 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV5A0A0B4J249 GPAA1P2-202ENST00000606848 1787 ntBASIC12.84□□□□□ -0.35
TRAV5A0A0B4J249 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV5A0A0B4J249 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
TRAV5A0A0B4J249 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
TRAV5A0A0B4J249 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV5A0A0B4J249 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV5A0A0B4J249 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV5A0A0B4J249 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
TRAV5A0A0B4J249 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV5A0A0B4J249 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
TRAV5A0A0B4J249 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV5A0A0B4J249 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC12.84□□□□□ -0.35
TRAV5A0A0B4J249 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV5A0A0B4J249 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV5A0A0B4J249 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV5A0A0B4J249 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
TRAV5A0A0B4J249 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
TRAV5A0A0B4J249 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC12.84□□□□□ -0.35
TRAV5A0A0B4J249 NUS1P2-201ENST00000417358 873 ntBASIC12.84□□□□□ -0.35
TRAV5A0A0B4J249 TMPOP1-202ENST00000424642 1267 ntBASIC12.84□□□□□ -0.35
TRAV5A0A0B4J249 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC12.84□□□□□ -0.35
TRAV5A0A0B4J249 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC12.84□□□□□ -0.35
TRAV5A0A0B4J249 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC12.84□□□□□ -0.35
TRAV5A0A0B4J249 AC104819.1-201ENST00000504587 486 ntBASIC12.84□□□□□ -0.35
TRAV5A0A0B4J249 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC12.84□□□□□ -0.35
TRAV5A0A0B4J249 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV5A0A0B4J249 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV5A0A0B4J249 AC099336.1-202ENST00000602961 463 ntBASIC12.84□□□□□ -0.35
TRAV5A0A0B4J249 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC12.84□□□□□ -0.35
TRAV5A0A0B4J249 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV5A0A0B4J249 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
TRAV5A0A0B4J249 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV5A0A0B4J249 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV5A0A0B4J249 AMT-233ENST00000636522 1620 ntTSL 2 BASIC12.84□□□□□ -0.35
TRAV5A0A0B4J249 ACE-203ENST00000413513 2237 ntTSL 2 BASIC12.84□□□□□ -0.35
TRAV5A0A0B4J249 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC12.83□□□□□ -0.35
TRAV5A0A0B4J249 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
TRAV5A0A0B4J249 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
TRAV5A0A0B4J249 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
TRAV5A0A0B4J249 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 NCF1C-201ENST00000438382 1427 ntBASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 AP005117.1-201ENST00000584346 1413 ntBASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 BET1L-202ENST00000332865 533 ntTSL 5 BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 ARL16-209ENST00000573715 763 ntTSL 3 BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 ARL16-211ENST00000576135 694 ntTSL 3 BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 AC116407.4-201ENST00000623319 1061 ntBASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms