Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHGA11Q9Y5H2 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.94■■□□□ 1.26
PCDHGA11Q9Y5H2 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHGA11Q9Y5H2 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC22.93■■□□□ 1.26
PCDHGA11Q9Y5H2 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHGA11Q9Y5H2 AC022211.4-201ENST00000625094 2161 ntBASIC22.93■■□□□ 1.26
PCDHGA11Q9Y5H2 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
PCDHGA11Q9Y5H2 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHGA11Q9Y5H2 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHGA11Q9Y5H2 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHGA11Q9Y5H2 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHGA11Q9Y5H2 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHGA11Q9Y5H2 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHGA11Q9Y5H2 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHGA11Q9Y5H2 KRT18P10-201ENST00000388836 1287 ntBASIC22.92■■□□□ 1.26
PCDHGA11Q9Y5H2 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHGA11Q9Y5H2 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHGA11Q9Y5H2 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHGA11Q9Y5H2 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHGA11Q9Y5H2 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.91■■□□□ 1.26
PCDHGA11Q9Y5H2 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC22.91■■□□□ 1.26
PCDHGA11Q9Y5H2 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC22.91■■□□□ 1.26
PCDHGA11Q9Y5H2 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHGA11Q9Y5H2 AC133552.2-201ENST00000619106 1032 ntBASIC22.91■■□□□ 1.26
PCDHGA11Q9Y5H2 AC009831.1-201ENST00000580420 1582 ntBASIC22.91■■□□□ 1.26
PCDHGA11Q9Y5H2 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHGA11Q9Y5H2 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHGA11Q9Y5H2 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHGA11Q9Y5H2 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC22.9■■□□□ 1.26
PCDHGA11Q9Y5H2 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHGA11Q9Y5H2 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHGA11Q9Y5H2 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHGA11Q9Y5H2 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHGA11Q9Y5H2 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
PCDHGA11Q9Y5H2 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
PCDHGA11Q9Y5H2 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PCDHGA11Q9Y5H2 HSD17B1P1-201ENST00000590052 955 ntBASIC22.89■■□□□ 1.25
PCDHGA11Q9Y5H2 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHGA11Q9Y5H2 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHGA11Q9Y5H2 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHGA11Q9Y5H2 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.88■■□□□ 1.25
PCDHGA11Q9Y5H2 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
PCDHGA11Q9Y5H2 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHGA11Q9Y5H2 RARRES2P2-201ENST00000394842 485 ntBASIC22.87■■□□□ 1.25
PCDHGA11Q9Y5H2 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
PCDHGA11Q9Y5H2 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHGA11Q9Y5H2 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHGA11Q9Y5H2 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
PCDHGA11Q9Y5H2 SLC6A10P-202ENST00000431994 2058 ntBASIC22.86■■□□□ 1.25
PCDHGA11Q9Y5H2 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHGA11Q9Y5H2 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
PCDHGA11Q9Y5H2 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHGA11Q9Y5H2 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.86■■□□□ 1.25
PCDHGA11Q9Y5H2 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHGA11Q9Y5H2 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHGA11Q9Y5H2 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC22.86■■□□□ 1.25
PCDHGA11Q9Y5H2 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHGA11Q9Y5H2 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
PCDHGA11Q9Y5H2 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHGA11Q9Y5H2 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHGA11Q9Y5H2 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.86■■□□□ 1.25
PCDHGA11Q9Y5H2 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC22.86■■□□□ 1.25
PCDHGA11Q9Y5H2 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHGA11Q9Y5H2 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
PCDHGA11Q9Y5H2 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHGA11Q9Y5H2 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGA11Q9Y5H2 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGA11Q9Y5H2 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC22.85■■□□□ 1.25
PCDHGA11Q9Y5H2 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC22.85■■□□□ 1.25
PCDHGA11Q9Y5H2 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGA11Q9Y5H2 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHGA11Q9Y5H2 HYI-213ENST00000583037 1322 ntTSL 5 BASIC22.84■■□□□ 1.25
PCDHGA11Q9Y5H2 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.84■■□□□ 1.25
PCDHGA11Q9Y5H2 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHGA11Q9Y5H2 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHGA11Q9Y5H2 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHGA11Q9Y5H2 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHGA11Q9Y5H2 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
PCDHGA11Q9Y5H2 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHGA11Q9Y5H2 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHGA11Q9Y5H2 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHGA11Q9Y5H2 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
PCDHGA11Q9Y5H2 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
PCDHGA11Q9Y5H2 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHGA11Q9Y5H2 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHGA11Q9Y5H2 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.83■■□□□ 1.25
PCDHGA11Q9Y5H2 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC22.83■■□□□ 1.25
PCDHGA11Q9Y5H2 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHGA11Q9Y5H2 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHGA11Q9Y5H2 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHGA11Q9Y5H2 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.83■■□□□ 1.24
PCDHGA11Q9Y5H2 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
PCDHGA11Q9Y5H2 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
PCDHGA11Q9Y5H2 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHGA11Q9Y5H2 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHGA11Q9Y5H2 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHGA11Q9Y5H2 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHGA11Q9Y5H2 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
PCDHGA11Q9Y5H2 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHGA11Q9Y5H2 AC138932.3-201ENST00000567634 1902 ntBASIC22.82■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 178.7 ms