Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.23■■□□□ 1.31
PCDHB11Q9Y5F2 ERN1-208ENST00000606895 2068 ntBASIC23.23■■□□□ 1.31
PCDHB11Q9Y5F2 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHB11Q9Y5F2 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
PCDHB11Q9Y5F2 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.22■■□□□ 1.31
PCDHB11Q9Y5F2 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHB11Q9Y5F2 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHB11Q9Y5F2 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.22■■□□□ 1.31
PCDHB11Q9Y5F2 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHB11Q9Y5F2 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
PCDHB11Q9Y5F2 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHB11Q9Y5F2 AL031848.2-201ENST00000607670 837 ntBASIC23.22■■□□□ 1.31
PCDHB11Q9Y5F2 AC135731.1-201ENST00000569415 2548 ntBASIC23.22■■□□□ 1.31
PCDHB11Q9Y5F2 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.22■■□□□ 1.31
PCDHB11Q9Y5F2 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHB11Q9Y5F2 AC010501.1-201ENST00000606270 1962 ntBASIC23.21■■□□□ 1.31
PCDHB11Q9Y5F2 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.21■■□□□ 1.31
PCDHB11Q9Y5F2 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHB11Q9Y5F2 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.21■■□□□ 1.31
PCDHB11Q9Y5F2 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.21■■□□□ 1.31
PCDHB11Q9Y5F2 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHB11Q9Y5F2 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
PCDHB11Q9Y5F2 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.21■■□□□ 1.31
PCDHB11Q9Y5F2 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHB11Q9Y5F2 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
PCDHB11Q9Y5F2 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.2■■□□□ 1.3
PCDHB11Q9Y5F2 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.2■■□□□ 1.3
PCDHB11Q9Y5F2 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHB11Q9Y5F2 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHB11Q9Y5F2 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHB11Q9Y5F2 GUSBP5-201ENST00000418136 578 ntBASIC23.2■■□□□ 1.3
PCDHB11Q9Y5F2 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.2■■□□□ 1.3
PCDHB11Q9Y5F2 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.2■■□□□ 1.3
PCDHB11Q9Y5F2 AC020928.2-201ENST00000588717 2197 ntBASIC23.2■■□□□ 1.3
PCDHB11Q9Y5F2 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB11Q9Y5F2 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.19■■□□□ 1.3
PCDHB11Q9Y5F2 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.19■■□□□ 1.3
PCDHB11Q9Y5F2 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
PCDHB11Q9Y5F2 KRT18P10-201ENST00000388836 1287 ntBASIC23.19■■□□□ 1.3
PCDHB11Q9Y5F2 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.19■■□□□ 1.3
PCDHB11Q9Y5F2 THA1P-201ENST00000590384 1145 ntBASIC23.19■■□□□ 1.3
PCDHB11Q9Y5F2 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB11Q9Y5F2 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.19■■□□□ 1.3
PCDHB11Q9Y5F2 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB11Q9Y5F2 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB11Q9Y5F2 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB11Q9Y5F2 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.19■■□□□ 1.3
PCDHB11Q9Y5F2 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB11Q9Y5F2 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB11Q9Y5F2 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB11Q9Y5F2 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.18■■□□□ 1.3
PCDHB11Q9Y5F2 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23.18■■□□□ 1.3
PCDHB11Q9Y5F2 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.18■■□□□ 1.3
PCDHB11Q9Y5F2 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
PCDHB11Q9Y5F2 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
PCDHB11Q9Y5F2 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB11Q9Y5F2 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
PCDHB11Q9Y5F2 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
PCDHB11Q9Y5F2 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHB11Q9Y5F2 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
PCDHB11Q9Y5F2 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHB11Q9Y5F2 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.17■■□□□ 1.3
PCDHB11Q9Y5F2 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.17■■□□□ 1.3
PCDHB11Q9Y5F2 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB11Q9Y5F2 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB11Q9Y5F2 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB11Q9Y5F2 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB11Q9Y5F2 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB11Q9Y5F2 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB11Q9Y5F2 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.16■■□□□ 1.3
PCDHB11Q9Y5F2 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB11Q9Y5F2 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.16■■□□□ 1.3
PCDHB11Q9Y5F2 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB11Q9Y5F2 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB11Q9Y5F2 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.16■■□□□ 1.3
PCDHB11Q9Y5F2 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB11Q9Y5F2 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
PCDHB11Q9Y5F2 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB11Q9Y5F2 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
PCDHB11Q9Y5F2 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.15■■□□□ 1.3
PCDHB11Q9Y5F2 AC103724.3-201ENST00000564481 992 ntBASIC23.15■■□□□ 1.3
PCDHB11Q9Y5F2 AC019171.1-201ENST00000601251 1056 ntBASIC23.15■■□□□ 1.3
PCDHB11Q9Y5F2 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB11Q9Y5F2 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB11Q9Y5F2 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.15■■□□□ 1.3
PCDHB11Q9Y5F2 AC019069.1-201ENST00000610008 1333 ntBASIC23.14■■□□□ 1.3
PCDHB11Q9Y5F2 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.14■■□□□ 1.3
PCDHB11Q9Y5F2 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.14■■□□□ 1.29
PCDHB11Q9Y5F2 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHB11Q9Y5F2 AC087393.1-201ENST00000582896 145 ntBASIC23.14■■□□□ 1.29
PCDHB11Q9Y5F2 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
PCDHB11Q9Y5F2 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHB11Q9Y5F2 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHB11Q9Y5F2 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHB11Q9Y5F2 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHB11Q9Y5F2 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHB11Q9Y5F2 AC096887.2-201ENST00000623443 1957 ntBASIC23.13■■□□□ 1.29
PCDHB11Q9Y5F2 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
PCDHB11Q9Y5F2 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHB11Q9Y5F2 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms