Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC32.8■■■□□ 2.84
NINLQ9Y2I6 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
NINLQ9Y2I6 PKM-203ENST00000389093 2279 ntTSL 5 BASIC32.8■■■□□ 2.84
NINLQ9Y2I6 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
NINLQ9Y2I6 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
NINLQ9Y2I6 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC32.79■■■□□ 2.84
NINLQ9Y2I6 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
NINLQ9Y2I6 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
NINLQ9Y2I6 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC32.79■■■□□ 2.84
NINLQ9Y2I6 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
NINLQ9Y2I6 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC32.79■■■□□ 2.84
NINLQ9Y2I6 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
NINLQ9Y2I6 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
NINLQ9Y2I6 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
NINLQ9Y2I6 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
NINLQ9Y2I6 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
NINLQ9Y2I6 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC32.77■■■□□ 2.84
NINLQ9Y2I6 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
NINLQ9Y2I6 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
NINLQ9Y2I6 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC32.77■■■□□ 2.84
NINLQ9Y2I6 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
NINLQ9Y2I6 AC096887.2-201ENST00000623443 1957 ntBASIC32.77■■■□□ 2.84
NINLQ9Y2I6 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
NINLQ9Y2I6 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
NINLQ9Y2I6 AC137630.3-201ENST00000607245 391 ntBASIC32.75■■■□□ 2.83
NINLQ9Y2I6 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
NINLQ9Y2I6 AL121749.1-202ENST00000609313 2153 ntBASIC32.75■■■□□ 2.83
NINLQ9Y2I6 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
NINLQ9Y2I6 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC32.74■■■□□ 2.83
NINLQ9Y2I6 AC010501.1-201ENST00000606270 1962 ntBASIC32.74■■■□□ 2.83
NINLQ9Y2I6 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC32.73■■■□□ 2.83
NINLQ9Y2I6 MIR4281-201ENST00000580852 62 ntBASIC32.73■■■□□ 2.83
NINLQ9Y2I6 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
NINLQ9Y2I6 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC32.73■■■□□ 2.83
NINLQ9Y2I6 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC32.73■■■□□ 2.83
NINLQ9Y2I6 BX664725.1-201ENST00000438252 379 ntBASIC32.72■■■□□ 2.83
NINLQ9Y2I6 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC32.72■■■□□ 2.83
NINLQ9Y2I6 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC32.72■■■□□ 2.83
NINLQ9Y2I6 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC32.72■■■□□ 2.83
NINLQ9Y2I6 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
NINLQ9Y2I6 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC32.72■■■□□ 2.83
NINLQ9Y2I6 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
NINLQ9Y2I6 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC32.71■■■□□ 2.83
NINLQ9Y2I6 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC32.71■■■□□ 2.83
NINLQ9Y2I6 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC32.71■■■□□ 2.83
NINLQ9Y2I6 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC32.71■■■□□ 2.83
NINLQ9Y2I6 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
NINLQ9Y2I6 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC32.7■■■□□ 2.83
NINLQ9Y2I6 AC239859.2-201ENST00000444165 318 ntBASIC32.7■■■□□ 2.83
NINLQ9Y2I6 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC32.7■■■□□ 2.83
NINLQ9Y2I6 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC32.7■■■□□ 2.83
NINLQ9Y2I6 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
NINLQ9Y2I6 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC32.7■■■□□ 2.82
NINLQ9Y2I6 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC32.69■■■□□ 2.82
NINLQ9Y2I6 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
NINLQ9Y2I6 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
NINLQ9Y2I6 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC32.69■■■□□ 2.82
NINLQ9Y2I6 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC32.69■■■□□ 2.82
NINLQ9Y2I6 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
NINLQ9Y2I6 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
NINLQ9Y2I6 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC32.68■■■□□ 2.82
NINLQ9Y2I6 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
NINLQ9Y2I6 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
NINLQ9Y2I6 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
NINLQ9Y2I6 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
NINLQ9Y2I6 SSSCA1-AS1-201ENST00000567594 614 ntBASIC32.68■■■□□ 2.82
NINLQ9Y2I6 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
NINLQ9Y2I6 ERN1-208ENST00000606895 2068 ntBASIC32.67■■■□□ 2.82
NINLQ9Y2I6 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
NINLQ9Y2I6 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC32.67■■■□□ 2.82
NINLQ9Y2I6 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
NINLQ9Y2I6 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC32.66■■■□□ 2.82
NINLQ9Y2I6 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
NINLQ9Y2I6 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC32.66■■■□□ 2.82
NINLQ9Y2I6 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC32.66■■■□□ 2.82
NINLQ9Y2I6 KRT125P-201ENST00000546827 989 ntBASIC32.66■■■□□ 2.82
NINLQ9Y2I6 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC32.66■■■□□ 2.82
NINLQ9Y2I6 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
NINLQ9Y2I6 AC021242.3-201ENST00000607598 1377 ntBASIC32.66■■■□□ 2.82
NINLQ9Y2I6 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
NINLQ9Y2I6 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC32.65■■■□□ 2.82
NINLQ9Y2I6 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC32.65■■■□□ 2.82
NINLQ9Y2I6 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
NINLQ9Y2I6 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
NINLQ9Y2I6 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC32.65■■■□□ 2.82
NINLQ9Y2I6 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC32.65■■■□□ 2.82
NINLQ9Y2I6 CREM-229ENST00000474362 1030 ntTSL 2 BASIC32.65■■■□□ 2.82
NINLQ9Y2I6 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC32.65■■■□□ 2.82
NINLQ9Y2I6 FOXO3B-201ENST00000395675 1928 ntBASIC32.65■■■□□ 2.82
NINLQ9Y2I6 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC32.65■■■□□ 2.82
NINLQ9Y2I6 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC32.65■■■□□ 2.82
NINLQ9Y2I6 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC32.65■■■□□ 2.82
NINLQ9Y2I6 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC32.64■■■□□ 2.82
NINLQ9Y2I6 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC32.64■■■□□ 2.82
NINLQ9Y2I6 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
NINLQ9Y2I6 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
NINLQ9Y2I6 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC32.64■■■□□ 2.82
NINLQ9Y2I6 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
NINLQ9Y2I6 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC32.64■■■□□ 2.81
NINLQ9Y2I6 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms