Protein–RNA interactions for Protein: Q9H7E2

TDRD3, Tudor domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 651 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDRD3Q9H7E2 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC28.54■■■□□ 2.16
TDRD3Q9H7E2 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC28.53■■■□□ 2.16
TDRD3Q9H7E2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC28.53■■■□□ 2.16
TDRD3Q9H7E2 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
TDRD3Q9H7E2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
TDRD3Q9H7E2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
TDRD3Q9H7E2 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC28.52■■■□□ 2.16
TDRD3Q9H7E2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC28.52■■■□□ 2.16
TDRD3Q9H7E2 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
TDRD3Q9H7E2 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
TDRD3Q9H7E2 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC28.52■■■□□ 2.16
TDRD3Q9H7E2 SHF-208ENST00000560734 1731 ntTSL 3 BASIC28.52■■■□□ 2.16
TDRD3Q9H7E2 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
TDRD3Q9H7E2 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
TDRD3Q9H7E2 AC142086.6-201ENST00000621154 1765 ntBASIC28.5■■■□□ 2.15
TDRD3Q9H7E2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC28.5■■■□□ 2.15
TDRD3Q9H7E2 SNAI3-AS1-204ENST00000567997 2048 ntBASIC28.5■■■□□ 2.15
TDRD3Q9H7E2 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC28.5■■■□□ 2.15
TDRD3Q9H7E2 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC28.5■■■□□ 2.15
TDRD3Q9H7E2 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
TDRD3Q9H7E2 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC28.49■■■□□ 2.15
TDRD3Q9H7E2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
TDRD3Q9H7E2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC28.49■■■□□ 2.15
TDRD3Q9H7E2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC28.49■■■□□ 2.15
TDRD3Q9H7E2 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC28.49■■■□□ 2.15
TDRD3Q9H7E2 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
TDRD3Q9H7E2 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC28.48■■■□□ 2.15
TDRD3Q9H7E2 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC28.48■■■□□ 2.15
TDRD3Q9H7E2 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
TDRD3Q9H7E2 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
TDRD3Q9H7E2 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC28.47■■■□□ 2.15
TDRD3Q9H7E2 AC131281.2-201ENST00000520478 145 ntBASIC28.47■■■□□ 2.15
TDRD3Q9H7E2 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC28.47■■■□□ 2.15
TDRD3Q9H7E2 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
TDRD3Q9H7E2 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
TDRD3Q9H7E2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC28.46■■■□□ 2.15
TDRD3Q9H7E2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC28.46■■■□□ 2.15
TDRD3Q9H7E2 SRR-208ENST00000576848 588 ntTSL 4 BASIC28.46■■■□□ 2.15
TDRD3Q9H7E2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC28.46■■■□□ 2.15
TDRD3Q9H7E2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
TDRD3Q9H7E2 GAK-223ENST00000628912 497 ntTSL 5 BASIC28.46■■■□□ 2.15
TDRD3Q9H7E2 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
TDRD3Q9H7E2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.15
TDRD3Q9H7E2 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC28.45■■■□□ 2.15
TDRD3Q9H7E2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC28.45■■■□□ 2.15
TDRD3Q9H7E2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC28.45■■■□□ 2.14
TDRD3Q9H7E2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC28.45■■■□□ 2.14
TDRD3Q9H7E2 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
TDRD3Q9H7E2 SHF-206ENST00000560471 2499 ntTSL 5 BASIC28.44■■■□□ 2.14
TDRD3Q9H7E2 MIR935-201ENST00000401179 91 ntBASIC28.44■■■□□ 2.14
TDRD3Q9H7E2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC28.44■■■□□ 2.14
TDRD3Q9H7E2 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC28.44■■■□□ 2.14
TDRD3Q9H7E2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC28.44■■■□□ 2.14
TDRD3Q9H7E2 AC010997.5-201ENST00000609182 354 ntBASIC28.44■■■□□ 2.14
TDRD3Q9H7E2 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
TDRD3Q9H7E2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC28.43■■■□□ 2.14
TDRD3Q9H7E2 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC28.42■■■□□ 2.14
TDRD3Q9H7E2 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
TDRD3Q9H7E2 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC28.42■■■□□ 2.14
TDRD3Q9H7E2 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC28.42■■■□□ 2.14
TDRD3Q9H7E2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC28.41■■■□□ 2.14
TDRD3Q9H7E2 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC28.41■■■□□ 2.14
TDRD3Q9H7E2 MIR638-201ENST00000385237 100 ntBASIC28.41■■■□□ 2.14
TDRD3Q9H7E2 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC28.41■■■□□ 2.14
TDRD3Q9H7E2 AC011551.1-201ENST00000614101 683 ntBASIC28.41■■■□□ 2.14
TDRD3Q9H7E2 AL117332.1-201ENST00000622628 974 ntBASIC28.41■■■□□ 2.14
TDRD3Q9H7E2 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC28.4■■■□□ 2.14
TDRD3Q9H7E2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC28.4■■■□□ 2.14
TDRD3Q9H7E2 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC28.4■■■□□ 2.14
TDRD3Q9H7E2 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC28.4■■■□□ 2.14
TDRD3Q9H7E2 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
TDRD3Q9H7E2 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC28.4■■■□□ 2.14
TDRD3Q9H7E2 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
TDRD3Q9H7E2 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC28.39■■■□□ 2.14
TDRD3Q9H7E2 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC28.39■■■□□ 2.14
TDRD3Q9H7E2 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
TDRD3Q9H7E2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
TDRD3Q9H7E2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
TDRD3Q9H7E2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC28.39■■■□□ 2.14
TDRD3Q9H7E2 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
TDRD3Q9H7E2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC28.39■■■□□ 2.14
TDRD3Q9H7E2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC28.39■■■□□ 2.14
TDRD3Q9H7E2 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
TDRD3Q9H7E2 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC28.39■■■□□ 2.13
TDRD3Q9H7E2 LSM4-201ENST00000252816 986 ntTSL 2 BASIC28.38■■■□□ 2.13
TDRD3Q9H7E2 MTDHP2-201ENST00000601468 714 ntBASIC28.38■■■□□ 2.13
TDRD3Q9H7E2 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
TDRD3Q9H7E2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC28.37■■■□□ 2.13
TDRD3Q9H7E2 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
TDRD3Q9H7E2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC28.37■■■□□ 2.13
TDRD3Q9H7E2 AL136116.3-201ENST00000402907 1138 ntBASIC28.37■■■□□ 2.13
TDRD3Q9H7E2 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
TDRD3Q9H7E2 TK2-202ENST00000417693 1046 ntTSL 2 BASIC28.37■■■□□ 2.13
TDRD3Q9H7E2 NALT1-201ENST00000429224 738 ntTSL 5 BASIC28.37■■■□□ 2.13
TDRD3Q9H7E2 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
TDRD3Q9H7E2 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC28.37■■■□□ 2.13
TDRD3Q9H7E2 MIR6724-1-201ENST00000616420 92 ntBASIC28.37■■■□□ 2.13
TDRD3Q9H7E2 MIR6724-2-201ENST00000616483 92 ntBASIC28.37■■■□□ 2.13
TDRD3Q9H7E2 MIR6724-4-201ENST00000617390 92 ntBASIC28.37■■■□□ 2.13
TDRD3Q9H7E2 MIR6724-3-201ENST00000622482 92 ntBASIC28.37■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms