Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
VPS16Q9H269 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.04■■□□□ 1.76
VPS16Q9H269 MIR3960-201ENST00000583311 91 ntBASIC26.04■■□□□ 1.76
VPS16Q9H269 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
VPS16Q9H269 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC26.04■■□□□ 1.76
VPS16Q9H269 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
VPS16Q9H269 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
VPS16Q9H269 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
VPS16Q9H269 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
VPS16Q9H269 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
VPS16Q9H269 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
VPS16Q9H269 TPT1-202ENST00000379055 948 ntTSL 2 BASIC26.02■■□□□ 1.76
VPS16Q9H269 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.02■■□□□ 1.76
VPS16Q9H269 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC26.02■■□□□ 1.76
VPS16Q9H269 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
VPS16Q9H269 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
VPS16Q9H269 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC26.01■■□□□ 1.75
VPS16Q9H269 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
VPS16Q9H269 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.01■■□□□ 1.75
VPS16Q9H269 AC092296.2-201ENST00000589470 999 ntBASIC26.01■■□□□ 1.75
VPS16Q9H269 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
VPS16Q9H269 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
VPS16Q9H269 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
VPS16Q9H269 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
VPS16Q9H269 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
VPS16Q9H269 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
VPS16Q9H269 EED-207ENST00000528180 1745 ntTSL 5 BASIC26■■□□□ 1.75
VPS16Q9H269 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC26■■□□□ 1.75
VPS16Q9H269 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
VPS16Q9H269 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC26■■□□□ 1.75
VPS16Q9H269 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
VPS16Q9H269 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
VPS16Q9H269 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
VPS16Q9H269 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
VPS16Q9H269 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
VPS16Q9H269 MIR639-201ENST00000384974 98 ntBASIC25.99■■□□□ 1.75
VPS16Q9H269 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
VPS16Q9H269 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
VPS16Q9H269 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
VPS16Q9H269 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
VPS16Q9H269 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC25.98■■□□□ 1.75
VPS16Q9H269 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
VPS16Q9H269 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
VPS16Q9H269 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC25.97■■□□□ 1.75
VPS16Q9H269 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC25.97■■□□□ 1.75
VPS16Q9H269 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
VPS16Q9H269 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
VPS16Q9H269 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
VPS16Q9H269 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
VPS16Q9H269 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
VPS16Q9H269 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC25.97■■□□□ 1.75
VPS16Q9H269 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
VPS16Q9H269 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
VPS16Q9H269 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
VPS16Q9H269 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
VPS16Q9H269 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
VPS16Q9H269 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
VPS16Q9H269 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
VPS16Q9H269 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
VPS16Q9H269 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
VPS16Q9H269 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
VPS16Q9H269 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
VPS16Q9H269 AC022413.1-201ENST00000624602 984 ntBASIC25.95■■□□□ 1.74
VPS16Q9H269 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
VPS16Q9H269 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
VPS16Q9H269 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
VPS16Q9H269 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC25.94■■□□□ 1.74
VPS16Q9H269 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC25.94■■□□□ 1.74
VPS16Q9H269 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
VPS16Q9H269 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
VPS16Q9H269 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
VPS16Q9H269 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC25.94■■□□□ 1.74
VPS16Q9H269 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC25.94■■□□□ 1.74
VPS16Q9H269 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC25.94■■□□□ 1.74
VPS16Q9H269 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC25.94■■□□□ 1.74
VPS16Q9H269 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
VPS16Q9H269 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
VPS16Q9H269 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC25.93■■□□□ 1.74
VPS16Q9H269 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
VPS16Q9H269 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
VPS16Q9H269 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC25.93■■□□□ 1.74
VPS16Q9H269 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
VPS16Q9H269 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC25.93■■□□□ 1.74
VPS16Q9H269 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC25.93■■□□□ 1.74
VPS16Q9H269 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
VPS16Q9H269 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
VPS16Q9H269 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
VPS16Q9H269 ECEL1P2-201ENST00000461596 1295 ntBASIC25.92■■□□□ 1.74
VPS16Q9H269 SRP68-213ENST00000629930 165 ntTSL 5 BASIC25.92■■□□□ 1.74
VPS16Q9H269 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
VPS16Q9H269 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC25.92■■□□□ 1.74
VPS16Q9H269 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
VPS16Q9H269 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.91■■□□□ 1.74
VPS16Q9H269 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
VPS16Q9H269 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
VPS16Q9H269 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
VPS16Q9H269 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
VPS16Q9H269 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC25.91■■□□□ 1.74
VPS16Q9H269 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
VPS16Q9H269 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 8.3 ms