Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CDT1Q9H211 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
CDT1Q9H211 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC25.93■■□□□ 1.74
CDT1Q9H211 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
CDT1Q9H211 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC25.92■■□□□ 1.74
CDT1Q9H211 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
CDT1Q9H211 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CDT1Q9H211 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC25.92■■□□□ 1.74
CDT1Q9H211 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC25.92■■□□□ 1.74
CDT1Q9H211 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
CDT1Q9H211 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC25.91■■□□□ 1.74
CDT1Q9H211 DUSP8P4-201ENST00000399538 1761 ntBASIC25.91■■□□□ 1.74
CDT1Q9H211 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.91■■□□□ 1.74
CDT1Q9H211 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CDT1Q9H211 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC25.9■■□□□ 1.74
CDT1Q9H211 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC25.9■■□□□ 1.74
CDT1Q9H211 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CDT1Q9H211 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CDT1Q9H211 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
CDT1Q9H211 AC097639.1-201ENST00000565519 1891 ntBASIC25.89■■□□□ 1.74
CDT1Q9H211 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CDT1Q9H211 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC25.88■■□□□ 1.73
CDT1Q9H211 AC022616.5-201ENST00000518796 181 ntBASIC25.88■■□□□ 1.73
CDT1Q9H211 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.88■■□□□ 1.73
CDT1Q9H211 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CDT1Q9H211 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CDT1Q9H211 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.87■■□□□ 1.73
CDT1Q9H211 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.87■■□□□ 1.73
CDT1Q9H211 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CDT1Q9H211 AL031848.2-201ENST00000607670 837 ntBASIC25.87■■□□□ 1.73
CDT1Q9H211 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CDT1Q9H211 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CDT1Q9H211 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CDT1Q9H211 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CDT1Q9H211 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC25.87■■□□□ 1.73
CDT1Q9H211 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.86■■□□□ 1.73
CDT1Q9H211 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CDT1Q9H211 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC25.86■■□□□ 1.73
CDT1Q9H211 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
CDT1Q9H211 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CDT1Q9H211 AC145676.1-201ENST00000514988 2004 ntBASIC25.86■■□□□ 1.73
CDT1Q9H211 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC25.86■■□□□ 1.73
CDT1Q9H211 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC25.85■■□□□ 1.73
CDT1Q9H211 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CDT1Q9H211 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CDT1Q9H211 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CDT1Q9H211 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC25.85■■□□□ 1.73
CDT1Q9H211 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CDT1Q9H211 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
CDT1Q9H211 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.84■■□□□ 1.73
CDT1Q9H211 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CDT1Q9H211 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CDT1Q9H211 AL592295.1-201ENST00000400984 884 ntBASIC25.84■■□□□ 1.73
CDT1Q9H211 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
CDT1Q9H211 AL035685.1-201ENST00000636663 812 ntBASIC25.84■■□□□ 1.73
CDT1Q9H211 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CDT1Q9H211 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CDT1Q9H211 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.83■■□□□ 1.73
CDT1Q9H211 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
CDT1Q9H211 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC25.83■■□□□ 1.73
CDT1Q9H211 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.72
CDT1Q9H211 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CDT1Q9H211 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CDT1Q9H211 AC009299.2-201ENST00000482477 511 ntBASIC25.82■■□□□ 1.72
CDT1Q9H211 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC25.82■■□□□ 1.72
CDT1Q9H211 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CDT1Q9H211 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CDT1Q9H211 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
CDT1Q9H211 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC25.81■■□□□ 1.72
CDT1Q9H211 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC25.81■■□□□ 1.72
CDT1Q9H211 PRTG-204ENST00000561292 833 ntTSL 3 BASIC25.81■■□□□ 1.72
CDT1Q9H211 FOXO3B-201ENST00000395675 1928 ntBASIC25.8■■□□□ 1.72
CDT1Q9H211 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CDT1Q9H211 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
CDT1Q9H211 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC25.8■■□□□ 1.72
CDT1Q9H211 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CDT1Q9H211 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CDT1Q9H211 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CDT1Q9H211 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC25.8■■□□□ 1.72
CDT1Q9H211 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CDT1Q9H211 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC25.79■■□□□ 1.72
CDT1Q9H211 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CDT1Q9H211 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CDT1Q9H211 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CDT1Q9H211 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC25.78■■□□□ 1.72
CDT1Q9H211 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CDT1Q9H211 KRT18P24-201ENST00000344739 1156 ntBASIC25.78■■□□□ 1.72
CDT1Q9H211 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CDT1Q9H211 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC25.77■■□□□ 1.72
CDT1Q9H211 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
CDT1Q9H211 AC120024.1-201ENST00000562672 995 ntBASIC25.77■■□□□ 1.72
CDT1Q9H211 TK2-216ENST00000564917 1156 ntTSL 3 BASIC25.77■■□□□ 1.72
CDT1Q9H211 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC25.77■■□□□ 1.72
CDT1Q9H211 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CDT1Q9H211 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CDT1Q9H211 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.77■■□□□ 1.72
CDT1Q9H211 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CDT1Q9H211 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CDT1Q9H211 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CDT1Q9H211 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms