Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 RAN-211ENST00000541679 572 ntTSL 5 BASIC9.96□□□□□ -0.824e-12■■■■■ 37
XRN2Q9H0D6 RAN-203ENST00000448750 2455 ntTSL 27.9□□□□□ -1.154e-12■■■■■ 37
XRN2Q9H0D6 RAN-206ENST00000535090 657 ntTSL 55.25□□□□□ -1.574e-12■■■■■ 37
XRN2Q9H0D6 UBE2Z-205ENST00000508468 573 ntTSL 326.77■■□□□ 1.884e-9■■■■■ 37
XRN2Q9H0D6 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.824e-9■■■■■ 37
XRN2Q9H0D6 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC27.25■■□□□ 1.957e-10■■■■■ 36.9
XRN2Q9H0D6 TOLLIP-204ENST00000527085 595 ntTSL 527.25■■□□□ 1.957e-10■■■■■ 36.9
XRN2Q9H0D6 TOLLIP-206ENST00000527746 590 ntTSL 225.73■■□□□ 1.717e-10■■■■■ 36.9
XRN2Q9H0D6 WWOX-215ENST00000569332 1856 ntTSL 225.55■■□□□ 1.682e-8■■■■■ 36.9
XRN2Q9H0D6 TOLLIP-210ENST00000530506 1297 ntTSL 523.88■■□□□ 1.417e-10■■■■■ 36.9
XRN2Q9H0D6 TOLLIP-205ENST00000527638 561 ntTSL 423.88■■□□□ 1.417e-10■■■■■ 36.9
XRN2Q9H0D6 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC22.36■■□□□ 1.177e-10■■■■■ 36.9
XRN2Q9H0D6 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.87■■□□□ 1.092e-8■■■■■ 36.9
XRN2Q9H0D6 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.62■■□□□ 1.052e-8■■■■■ 36.9
XRN2Q9H0D6 TOLLIP-211ENST00000530541 684 ntTSL 220.18■□□□□ 0.827e-10■■■■■ 36.9
XRN2Q9H0D6 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.93■□□□□ 0.782e-8■■■■■ 36.9
XRN2Q9H0D6 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.612e-8■■■■■ 36.9
XRN2Q9H0D6 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC18.42■□□□□ 0.542e-8■■■■■ 36.9
XRN2Q9H0D6 TOLLIP-213ENST00000532551 576 ntTSL 214.64□□□□□ -0.077e-10■■■■■ 36.9
XRN2Q9H0D6 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.287e-10■■■■■ 36.9
XRN2Q9H0D6 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC12.82□□□□□ -0.367e-10■■■■■ 36.9
XRN2Q9H0D6 ATF5-203ENST00000596658 722 ntTSL 220.99■□□□□ 0.953e-7■■■■■ 36.8
XRN2Q9H0D6 CSNK1G3-204ENST00000508708 920 ntTSL 227.73■■■□□ 2.035e-7■■■■■ 36.8
XRN2Q9H0D6 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC25.55■■□□□ 1.685e-7■■■■■ 36.8
XRN2Q9H0D6 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC24.03■■□□□ 1.445e-7■■■■■ 36.8
XRN2Q9H0D6 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.115e-7■■■■■ 36.8
XRN2Q9H0D6 KMT5B-211ENST00000458496 556 ntTSL 430.24■■■□□ 2.435e-7■■■■■ 36.7
XRN2Q9H0D6 KMT5B-207ENST00000427752 2475 ntTSL 222.23■■□□□ 1.155e-7■■■■■ 36.7
XRN2Q9H0D6 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.29■■□□□ 15e-7■■■■■ 36.7
XRN2Q9H0D6 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.91■□□□□ 0.945e-7■■■■■ 36.7
XRN2Q9H0D6 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.875e-7■■■■■ 36.7
XRN2Q9H0D6 HIP1R-202ENST00000452196 2054 ntTSL 1 (best)19.57■□□□□ 0.721e-8■■■■■ 36.7
XRN2Q9H0D6 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.83■□□□□ 0.615e-7■■■■■ 36.7
XRN2Q9H0D6 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.291e-8■■■■■ 36.7
XRN2Q9H0D6 KMT5B-212ENST00000466295 638 ntTSL 216.45■□□□□ 0.225e-7■■■■■ 36.7
XRN2Q9H0D6 HIP1R-204ENST00000535831 3078 ntTSL 215.08■□□□□ 01e-8■■■■■ 36.7
XRN2Q9H0D6 DCUN1D4-222ENST00000513800 949 ntTSL 229.86■■■□□ 2.372e-6■■■■■ 36.6
XRN2Q9H0D6 DCUN1D4-220ENST00000511675 643 ntTSL 229.86■■■□□ 2.372e-6■■■■■ 36.6
XRN2Q9H0D6 DCUN1D4-211ENST00000506673 548 ntTSL 429.86■■■□□ 2.372e-6■■■■■ 36.6
XRN2Q9H0D6 DCUN1D4-205ENST00000502930 548 ntTSL 429.08■■■□□ 2.252e-6■■■■■ 36.6
XRN2Q9H0D6 DCUN1D4-206ENST00000504113 594 ntTSL 426.32■■□□□ 1.82e-6■■■■■ 36.6
XRN2Q9H0D6 DCUN1D4-213ENST00000507741 1584 ntTSL 224.88■■□□□ 1.572e-6■■■■■ 36.6
XRN2Q9H0D6 DCUN1D4-216ENST00000509376 2293 ntTSL 220.19■□□□□ 0.822e-6■■■■■ 36.6
XRN2Q9H0D6 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.41■□□□□ 0.72e-6■■■■■ 36.6
XRN2Q9H0D6 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.18■□□□□ 0.662e-6■■■■■ 36.6
XRN2Q9H0D6 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.022e-6■■■■■ 36.6
XRN2Q9H0D6 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.85□□□□□ -0.192e-6■■■■■ 36.6
XRN2Q9H0D6 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.252e-6■■■■■ 36.6
XRN2Q9H0D6 UBTF-206ENST00000527034 3010 ntTSL 5 BASIC13.08□□□□□ -0.322e-6■■■■■ 36.6
XRN2Q9H0D6 DCUN1D4-204ENST00000477560 4840 ntTSL 25.51□□□□□ -1.532e-6■■■■■ 36.6
XRN2Q9H0D6 GUK1-233ENST00000491613 959 ntTSL 315.82■□□□□ 0.121e-8■■■■■ 36.6
XRN2Q9H0D6 GUK1-226ENST00000484953 273 ntTSL 215.79■□□□□ 0.121e-8■■■■■ 36.6
XRN2Q9H0D6 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.051e-6■■■■■ 36.6
XRN2Q9H0D6 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC16.36■□□□□ 0.212e-6■■■■■ 36.6
XRN2Q9H0D6 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.325e-9■■■■■ 36.6
XRN2Q9H0D6 MIR663AHG-224ENST00000601119 750 ntTSL 515.44■□□□□ 0.063e-7■■■■■ 36.5
XRN2Q9H0D6 MIR663AHG-226ENST00000601901 644 ntTSL 515.06■□□□□ 03e-7■■■■■ 36.5
XRN2Q9H0D6 MIR663AHG-204ENST00000594130 628 ntTSL 514.37□□□□□ -0.113e-7■■■■■ 36.5
XRN2Q9H0D6 MIR663AHG-234ENST00000609687 697 ntTSL 513.77□□□□□ -0.213e-7■■■■■ 36.5
XRN2Q9H0D6 MIR663AHG-208ENST00000596058 665 ntTSL 5 BASIC12.23□□□□□ -0.453e-7■■■■■ 36.5
XRN2Q9H0D6 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC8.6□□□□□ -1.033e-7■■■■■ 36.5
XRN2Q9H0D6 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.572e-7■■■■■ 36.5
XRN2Q9H0D6 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.112e-7■■■■■ 36.5
XRN2Q9H0D6 FAM107B-212ENST00000471815 899 ntTSL 216.32■□□□□ 0.22e-7■■■■■ 36.5
XRN2Q9H0D6 FAM107B-221ENST00000487335 2317 ntTSL 1 (best)12.01□□□□□ -0.492e-7■■■■■ 36.5
XRN2Q9H0D6 FAM107B-224ENST00000491458 425 ntTSL 310.21□□□□□ -0.772e-7■■■■■ 36.5
XRN2Q9H0D6 FAM107B-201ENST00000181796 3785 ntTSL 2 BASIC9.2□□□□□ -0.942e-7■■■■■ 36.5
XRN2Q9H0D6 FAM107B-207ENST00000442012 458 ntTSL 53.37□□□□□ -1.872e-7■■■■■ 36.5
XRN2Q9H0D6 PLEKHA1-206ENST00000463663 617 ntTSL 528.8■■■□□ 2.22e-7■■■■■ 36.5
XRN2Q9H0D6 PLEKHA1-208ENST00000494222 603 ntTSL 324.03■■□□□ 1.442e-7■■■■■ 36.5
XRN2Q9H0D6 PLEKHA1-202ENST00000368989 3771 ntTSL 5 BASIC12.78□□□□□ -0.362e-7■■■■■ 36.5
XRN2Q9H0D6 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.482e-7■■■■■ 36.5
XRN2Q9H0D6 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.96■□□□□ 0.472e-7■■■■■ 36.3
XRN2Q9H0D6 SRRM2-226ENST00000576415 461 ntTSL 230.22■■■□□ 2.432e-9■■■■■ 36.3
XRN2Q9H0D6 SRRM2-223ENST00000575701 860 ntTSL 329.67■■■□□ 2.342e-9■■■■■ 36.3
XRN2Q9H0D6 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC24.33■■□□□ 1.495e-8■■■■■ 36.2
XRN2Q9H0D6 ZNF644-211ENST00000498303 514 ntTSL 1 (best)16.76■□□□□ 0.275e-8■■■■■ 36.2
XRN2Q9H0D6 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.065e-8■■■■■ 36.2
XRN2Q9H0D6 ZNF644-210ENST00000495966 820 ntTSL 38.58□□□□□ -1.045e-8■■■■■ 36.2
XRN2Q9H0D6 ZNF644-205ENST00000467231 851 ntTSL 33.41□□□□□ -1.865e-8■■■■■ 36.2
XRN2Q9H0D6 ZMIZ2-207ENST00000457123 747 ntTSL 537.69■■■■□ 3.622e-6■■■■■ 36
XRN2Q9H0D6 MAP3K11-211ENST00000533032 579 ntTSL 333.03■■■□□ 2.882e-6■■■■■ 36
XRN2Q9H0D6 PURA-202ENST00000502351 502 ntTSL 231.39■■■□□ 2.622e-6■■■■■ 36
XRN2Q9H0D6 GSK3A-203ENST00000453535 1897 ntTSL 529.91■■■□□ 2.382e-6■■■■■ 36
XRN2Q9H0D6 STK32C-203ENST00000368620 830 ntTSL 328.41■■■□□ 2.142e-6■■■■■ 36
XRN2Q9H0D6 SIPA1L1-210ENST00000555652 379 ntTSL 327.97■■■□□ 2.072e-6■■■■■ 36
XRN2Q9H0D6 PPP1R37-206ENST00000544069 712 ntTSL 527.83■■■□□ 2.052e-6■■■■■ 36
XRN2Q9H0D6 MED16-206ENST00000586342 635 ntTSL 1 (best)26.97■■□□□ 1.912e-6■■■■■ 36
XRN2Q9H0D6 SLC6A9-211ENST00000533007 508 ntTSL 426.77■■□□□ 1.882e-6■■■■■ 36
XRN2Q9H0D6 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC26.62■■□□□ 1.852e-6■■■■■ 36
XRN2Q9H0D6 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.852e-22■■■■■ 36
XRN2Q9H0D6 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC26.43■■□□□ 1.822e-6■■■■■ 36
XRN2Q9H0D6 WDR4-206ENST00000479429 759 ntTSL 525.85■■□□□ 1.732e-6■■■■■ 36
XRN2Q9H0D6 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.722e-6■■■■■ 36
XRN2Q9H0D6 SPSB3-203ENST00000563705 876 ntTSL 525.33■■□□□ 1.658e-12■■■■■ 36
XRN2Q9H0D6 HMGB3-205ENST00000455596 793 ntAPPRIS ALT2 TSL 1 (best)25.26■■□□□ 1.632e-6■■■■■ 36
XRN2Q9H0D6 SPSB3-209ENST00000567868 1628 ntTSL 324.93■■□□□ 1.588e-12■■■■■ 36
XRN2Q9H0D6 ZNF414-206ENST00000596772 579 ntTSL 224.83■■□□□ 1.572e-6■■■■■ 36
XRN2Q9H0D6 COPS8-207ENST00000470452 1005 ntTSL 1 (best)24.83■■□□□ 1.572e-6■■■■■ 36
XRN2Q9H0D6 WDR4-204ENST00000470658 901 ntTSL 524.3■■□□□ 1.482e-6■■■■■ 36
Retrieved 100 of 21,068 protein–RNA pairs in 314.4 ms