Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
UBE2OQ9C0C9 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
UBE2OQ9C0C9 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
UBE2OQ9C0C9 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
UBE2OQ9C0C9 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
UBE2OQ9C0C9 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
UBE2OQ9C0C9 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
UBE2OQ9C0C9 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
UBE2OQ9C0C9 HYI-206ENST00000372434 1025 ntTSL 5 BASIC26.34■■□□□ 1.81
UBE2OQ9C0C9 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
UBE2OQ9C0C9 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC26.34■■□□□ 1.81
UBE2OQ9C0C9 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC26.34■■□□□ 1.81
UBE2OQ9C0C9 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
UBE2OQ9C0C9 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
UBE2OQ9C0C9 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
UBE2OQ9C0C9 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
UBE2OQ9C0C9 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
UBE2OQ9C0C9 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
UBE2OQ9C0C9 AL031432.3-201ENST00000607698 485 ntBASIC26.33■■□□□ 1.81
UBE2OQ9C0C9 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC26.32■■□□□ 1.8
UBE2OQ9C0C9 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.32■■□□□ 1.8
UBE2OQ9C0C9 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC26.32■■□□□ 1.8
UBE2OQ9C0C9 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC26.32■■□□□ 1.8
UBE2OQ9C0C9 RASSF1-AS1-201ENST00000629828 790 ntBASIC26.32■■□□□ 1.8
UBE2OQ9C0C9 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC26.32■■□□□ 1.8
UBE2OQ9C0C9 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
UBE2OQ9C0C9 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
UBE2OQ9C0C9 UNC93B3-201ENST00000308076 687 ntBASIC26.31■■□□□ 1.8
UBE2OQ9C0C9 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
UBE2OQ9C0C9 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.31■■□□□ 1.8
UBE2OQ9C0C9 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.31■■□□□ 1.8
UBE2OQ9C0C9 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
UBE2OQ9C0C9 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC26.3■■□□□ 1.8
UBE2OQ9C0C9 GLI3-203ENST00000437480 451 ntTSL 2 BASIC26.3■■□□□ 1.8
UBE2OQ9C0C9 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC26.3■■□□□ 1.8
UBE2OQ9C0C9 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC26.3■■□□□ 1.8
UBE2OQ9C0C9 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC26.3■■□□□ 1.8
UBE2OQ9C0C9 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
UBE2OQ9C0C9 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
UBE2OQ9C0C9 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
UBE2OQ9C0C9 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
UBE2OQ9C0C9 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.29■■□□□ 1.8
UBE2OQ9C0C9 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC26.29■■□□□ 1.8
UBE2OQ9C0C9 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC26.29■■□□□ 1.8
UBE2OQ9C0C9 AL136162.1-201ENST00000607711 1078 ntBASIC26.29■■□□□ 1.8
UBE2OQ9C0C9 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
UBE2OQ9C0C9 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
UBE2OQ9C0C9 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
UBE2OQ9C0C9 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
UBE2OQ9C0C9 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
UBE2OQ9C0C9 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC26.28■■□□□ 1.8
UBE2OQ9C0C9 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC26.28■■□□□ 1.8
UBE2OQ9C0C9 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC26.28■■□□□ 1.8
UBE2OQ9C0C9 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
UBE2OQ9C0C9 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
UBE2OQ9C0C9 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
UBE2OQ9C0C9 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
UBE2OQ9C0C9 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC26.27■■□□□ 1.8
UBE2OQ9C0C9 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
UBE2OQ9C0C9 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
UBE2OQ9C0C9 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
UBE2OQ9C0C9 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
UBE2OQ9C0C9 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
UBE2OQ9C0C9 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC26.26■■□□□ 1.79
UBE2OQ9C0C9 AC105265.2-201ENST00000467189 838 ntBASIC26.26■■□□□ 1.79
UBE2OQ9C0C9 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC26.26■■□□□ 1.79
UBE2OQ9C0C9 MIR6821-201ENST00000617625 74 ntBASIC26.25■■□□□ 1.79
UBE2OQ9C0C9 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
UBE2OQ9C0C9 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.25■■□□□ 1.79
UBE2OQ9C0C9 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
UBE2OQ9C0C9 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
UBE2OQ9C0C9 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.25■■□□□ 1.79
UBE2OQ9C0C9 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.24■■□□□ 1.79
UBE2OQ9C0C9 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
UBE2OQ9C0C9 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
UBE2OQ9C0C9 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
UBE2OQ9C0C9 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC26.24■■□□□ 1.79
UBE2OQ9C0C9 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
UBE2OQ9C0C9 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC26.24■■□□□ 1.79
UBE2OQ9C0C9 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
UBE2OQ9C0C9 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
UBE2OQ9C0C9 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
UBE2OQ9C0C9 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
UBE2OQ9C0C9 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
UBE2OQ9C0C9 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
UBE2OQ9C0C9 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC26.23■■□□□ 1.79
UBE2OQ9C0C9 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26.23■■□□□ 1.79
UBE2OQ9C0C9 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
UBE2OQ9C0C9 AL355001.2-201ENST00000620617 1191 ntBASIC26.23■■□□□ 1.79
UBE2OQ9C0C9 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
UBE2OQ9C0C9 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
UBE2OQ9C0C9 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
UBE2OQ9C0C9 EDA-201ENST00000338901 1233 ntBASIC26.22■■□□□ 1.79
UBE2OQ9C0C9 CD72-202ENST00000378430 585 ntTSL 3 BASIC26.22■■□□□ 1.79
UBE2OQ9C0C9 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC26.22■■□□□ 1.79
UBE2OQ9C0C9 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC26.22■■□□□ 1.79
UBE2OQ9C0C9 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
UBE2OQ9C0C9 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
UBE2OQ9C0C9 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
UBE2OQ9C0C9 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms