Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.76■■□□□ 1.07
TRIM2Q9C040 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM2Q9C040 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM2Q9C040 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM2Q9C040 AC138932.3-201ENST00000567634 1902 ntBASIC21.76■■□□□ 1.07
TRIM2Q9C040 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM2Q9C040 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM2Q9C040 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM2Q9C040 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM2Q9C040 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM2Q9C040 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM2Q9C040 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM2Q9C040 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
TRIM2Q9C040 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM2Q9C040 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM2Q9C040 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM2Q9C040 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM2Q9C040 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM2Q9C040 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
TRIM2Q9C040 RAP2CP1-202ENST00000605179 643 ntBASIC21.73■■□□□ 1.07
TRIM2Q9C040 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
TRIM2Q9C040 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM2Q9C040 SLC6A10P-202ENST00000431994 2058 ntBASIC21.73■■□□□ 1.07
TRIM2Q9C040 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM2Q9C040 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.72■■□□□ 1.07
TRIM2Q9C040 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM2Q9C040 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM2Q9C040 KRT18P10-201ENST00000388836 1287 ntBASIC21.71■■□□□ 1.07
TRIM2Q9C040 AC026202.3-201ENST00000600805 1127 ntBASIC21.71■■□□□ 1.07
TRIM2Q9C040 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM2Q9C040 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM2Q9C040 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM2Q9C040 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.71■■□□□ 1.07
TRIM2Q9C040 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM2Q9C040 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
TRIM2Q9C040 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM2Q9C040 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
TRIM2Q9C040 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
TRIM2Q9C040 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.7■■□□□ 1.06
TRIM2Q9C040 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM2Q9C040 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM2Q9C040 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM2Q9C040 AP003733.4-201ENST00000623785 1697 ntBASIC21.69■■□□□ 1.06
TRIM2Q9C040 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM2Q9C040 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
TRIM2Q9C040 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM2Q9C040 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
TRIM2Q9C040 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
TRIM2Q9C040 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM2Q9C040 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM2Q9C040 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM2Q9C040 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM2Q9C040 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.69■■□□□ 1.06
TRIM2Q9C040 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM2Q9C040 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM2Q9C040 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
TRIM2Q9C040 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM2Q9C040 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.68■■□□□ 1.06
TRIM2Q9C040 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM2Q9C040 NTF6A-201ENST00000591175 560 ntBASIC21.68■■□□□ 1.06
TRIM2Q9C040 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM2Q9C040 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM2Q9C040 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
TRIM2Q9C040 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.68■■□□□ 1.06
TRIM2Q9C040 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM2Q9C040 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM2Q9C040 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM2Q9C040 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM2Q9C040 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
TRIM2Q9C040 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
TRIM2Q9C040 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM2Q9C040 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.67■■□□□ 1.06
TRIM2Q9C040 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
TRIM2Q9C040 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM2Q9C040 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
TRIM2Q9C040 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM2Q9C040 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM2Q9C040 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM2Q9C040 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.66■■□□□ 1.06
TRIM2Q9C040 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM2Q9C040 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM2Q9C040 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM2Q9C040 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
TRIM2Q9C040 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM2Q9C040 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM2Q9C040 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM2Q9C040 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM2Q9C040 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM2Q9C040 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM2Q9C040 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.65■■□□□ 1.06
TRIM2Q9C040 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TRIM2Q9C040 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TRIM2Q9C040 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM2Q9C040 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM2Q9C040 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
TRIM2Q9C040 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM2Q9C040 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM2Q9C040 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM2Q9C040 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
TRIM2Q9C040 AL139125.2-201ENST00000623134 1869 ntBASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms