Protein–RNA interactions for Protein: Q9BWD3

RTL8A, Retrotransposon Gag-like protein 8A, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8AQ9BWD3 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTL8AQ9BWD3 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
RTL8AQ9BWD3 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RTL8AQ9BWD3 ABHD17AP5-201ENST00000580133 923 ntBASIC20.24■□□□□ 0.83
RTL8AQ9BWD3 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RTL8AQ9BWD3 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.24■□□□□ 0.83
RTL8AQ9BWD3 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.24■□□□□ 0.83
RTL8AQ9BWD3 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTL8AQ9BWD3 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTL8AQ9BWD3 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTL8AQ9BWD3 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTL8AQ9BWD3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTL8AQ9BWD3 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.24■□□□□ 0.83
RTL8AQ9BWD3 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RTL8AQ9BWD3 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTL8AQ9BWD3 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTL8AQ9BWD3 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTL8AQ9BWD3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTL8AQ9BWD3 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTL8AQ9BWD3 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTL8AQ9BWD3 AC022211.4-201ENST00000625094 2161 ntBASIC20.22■□□□□ 0.83
RTL8AQ9BWD3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTL8AQ9BWD3 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RTL8AQ9BWD3 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTL8AQ9BWD3 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.22■□□□□ 0.83
RTL8AQ9BWD3 U85056.1-201ENST00000616429 682 ntBASIC20.22■□□□□ 0.83
RTL8AQ9BWD3 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RTL8AQ9BWD3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTL8AQ9BWD3 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTL8AQ9BWD3 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.22■□□□□ 0.83
RTL8AQ9BWD3 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RTL8AQ9BWD3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTL8AQ9BWD3 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.21■□□□□ 0.83
RTL8AQ9BWD3 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTL8AQ9BWD3 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTL8AQ9BWD3 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTL8AQ9BWD3 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTL8AQ9BWD3 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTL8AQ9BWD3 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
RTL8AQ9BWD3 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTL8AQ9BWD3 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
RTL8AQ9BWD3 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
RTL8AQ9BWD3 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.2■□□□□ 0.82
RTL8AQ9BWD3 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTL8AQ9BWD3 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTL8AQ9BWD3 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.2■□□□□ 0.82
RTL8AQ9BWD3 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTL8AQ9BWD3 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTL8AQ9BWD3 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTL8AQ9BWD3 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RTL8AQ9BWD3 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTL8AQ9BWD3 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.19■□□□□ 0.82
RTL8AQ9BWD3 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTL8AQ9BWD3 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTL8AQ9BWD3 MIR6765-201ENST00000614092 87 ntBASIC20.19■□□□□ 0.82
RTL8AQ9BWD3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.19■□□□□ 0.82
RTL8AQ9BWD3 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RTL8AQ9BWD3 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.19■□□□□ 0.82
RTL8AQ9BWD3 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTL8AQ9BWD3 SLC6A10P-202ENST00000431994 2058 ntBASIC20.18■□□□□ 0.82
RTL8AQ9BWD3 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RTL8AQ9BWD3 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.18■□□□□ 0.82
RTL8AQ9BWD3 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
RTL8AQ9BWD3 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.18■□□□□ 0.82
RTL8AQ9BWD3 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RTL8AQ9BWD3 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTL8AQ9BWD3 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.18■□□□□ 0.82
RTL8AQ9BWD3 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTL8AQ9BWD3 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTL8AQ9BWD3 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RTL8AQ9BWD3 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTL8AQ9BWD3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RTL8AQ9BWD3 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTL8AQ9BWD3 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTL8AQ9BWD3 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTL8AQ9BWD3 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.17■□□□□ 0.82
RTL8AQ9BWD3 DUX4L9-201ENST00000449051 1259 ntBASIC20.17■□□□□ 0.82
RTL8AQ9BWD3 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.17■□□□□ 0.82
RTL8AQ9BWD3 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
RTL8AQ9BWD3 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTL8AQ9BWD3 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.17■□□□□ 0.82
RTL8AQ9BWD3 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTL8AQ9BWD3 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RTL8AQ9BWD3 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RTL8AQ9BWD3 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RTL8AQ9BWD3 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
RTL8AQ9BWD3 SPCS2P3-201ENST00000500401 656 ntBASIC20.16■□□□□ 0.82
RTL8AQ9BWD3 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTL8AQ9BWD3 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
RTL8AQ9BWD3 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTL8AQ9BWD3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTL8AQ9BWD3 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.15■□□□□ 0.82
RTL8AQ9BWD3 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTL8AQ9BWD3 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.15■□□□□ 0.82
RTL8AQ9BWD3 RPS2P7-201ENST00000447334 885 ntBASIC20.15■□□□□ 0.82
RTL8AQ9BWD3 NTF6A-201ENST00000591175 560 ntBASIC20.15■□□□□ 0.82
RTL8AQ9BWD3 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
RTL8AQ9BWD3 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTL8AQ9BWD3 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTL8AQ9BWD3 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms