Protein–RNA interactions for Protein: Q99731

CCL19, C-C motif chemokine 19, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL19Q99731 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.24■□□□□ 0.83
CCL19Q99731 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CCL19Q99731 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCL19Q99731 MIR6724-1-201ENST00000616420 92 ntBASIC20.24■□□□□ 0.83
CCL19Q99731 MIR6724-2-201ENST00000616483 92 ntBASIC20.24■□□□□ 0.83
CCL19Q99731 MIR6724-4-201ENST00000617390 92 ntBASIC20.24■□□□□ 0.83
CCL19Q99731 MIR6724-3-201ENST00000622482 92 ntBASIC20.24■□□□□ 0.83
CCL19Q99731 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.24■□□□□ 0.83
CCL19Q99731 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.24■□□□□ 0.83
CCL19Q99731 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCL19Q99731 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCL19Q99731 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCL19Q99731 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCL19Q99731 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CCL19Q99731 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
CCL19Q99731 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.23■□□□□ 0.83
CCL19Q99731 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CCL19Q99731 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCL19Q99731 AL356740.2-201ENST00000601559 647 ntBASIC20.23■□□□□ 0.83
CCL19Q99731 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.23■□□□□ 0.83
CCL19Q99731 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCL19Q99731 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCL19Q99731 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC20.23■□□□□ 0.83
CCL19Q99731 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCL19Q99731 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCL19Q99731 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCL19Q99731 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCL19Q99731 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCL19Q99731 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CCL19Q99731 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.22■□□□□ 0.83
CCL19Q99731 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCL19Q99731 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.22■□□□□ 0.83
CCL19Q99731 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CCL19Q99731 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCL19Q99731 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCL19Q99731 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCL19Q99731 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.21■□□□□ 0.83
CCL19Q99731 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
CCL19Q99731 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCL19Q99731 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CCL19Q99731 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.21■□□□□ 0.83
CCL19Q99731 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCL19Q99731 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCL19Q99731 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCL19Q99731 MIR3621-201ENST00000580529 85 ntBASIC20.2■□□□□ 0.82
CCL19Q99731 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.2■□□□□ 0.82
CCL19Q99731 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CCL19Q99731 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.2■□□□□ 0.82
CCL19Q99731 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCL19Q99731 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.2■□□□□ 0.82
CCL19Q99731 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCL19Q99731 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCL19Q99731 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCL19Q99731 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCL19Q99731 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.19■□□□□ 0.82
CCL19Q99731 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.19■□□□□ 0.82
CCL19Q99731 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.19■□□□□ 0.82
CCL19Q99731 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCL19Q99731 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCL19Q99731 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
CCL19Q99731 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CCL19Q99731 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.18■□□□□ 0.82
CCL19Q99731 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.18■□□□□ 0.82
CCL19Q99731 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.18■□□□□ 0.82
CCL19Q99731 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.18■□□□□ 0.82
CCL19Q99731 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.17■□□□□ 0.82
CCL19Q99731 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.17■□□□□ 0.82
CCL19Q99731 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CCL19Q99731 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCL19Q99731 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.17■□□□□ 0.82
CCL19Q99731 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.17■□□□□ 0.82
CCL19Q99731 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCL19Q99731 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCL19Q99731 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
CCL19Q99731 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.17■□□□□ 0.82
CCL19Q99731 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.17■□□□□ 0.82
CCL19Q99731 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.17■□□□□ 0.82
CCL19Q99731 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCL19Q99731 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.17■□□□□ 0.82
CCL19Q99731 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCL19Q99731 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCL19Q99731 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCL19Q99731 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.16■□□□□ 0.82
CCL19Q99731 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.16■□□□□ 0.82
CCL19Q99731 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.16■□□□□ 0.82
CCL19Q99731 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.16■□□□□ 0.82
CCL19Q99731 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCL19Q99731 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCL19Q99731 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCL19Q99731 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.15■□□□□ 0.82
CCL19Q99731 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.15■□□□□ 0.82
CCL19Q99731 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.15■□□□□ 0.82
CCL19Q99731 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.15■□□□□ 0.82
CCL19Q99731 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCL19Q99731 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCL19Q99731 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CCL19Q99731 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CCL19Q99731 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCL19Q99731 AC096631.2-201ENST00000436136 790 ntBASIC20.14■□□□□ 0.81
CCL19Q99731 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms