Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
PRICKLE1Q96MT3 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC24.58■■□□□ 1.53
PRICKLE1Q96MT3 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
PRICKLE1Q96MT3 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
PRICKLE1Q96MT3 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
PRICKLE1Q96MT3 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
PRICKLE1Q96MT3 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PRICKLE1Q96MT3 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC24.58■■□□□ 1.53
PRICKLE1Q96MT3 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC24.58■■□□□ 1.53
PRICKLE1Q96MT3 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24.58■■□□□ 1.52
PRICKLE1Q96MT3 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
PRICKLE1Q96MT3 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.57■■□□□ 1.52
PRICKLE1Q96MT3 YBX1P4-201ENST00000392794 808 ntBASIC24.57■■□□□ 1.52
PRICKLE1Q96MT3 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PRICKLE1Q96MT3 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC24.57■■□□□ 1.52
PRICKLE1Q96MT3 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC24.57■■□□□ 1.52
PRICKLE1Q96MT3 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PRICKLE1Q96MT3 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
PRICKLE1Q96MT3 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PRICKLE1Q96MT3 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
PRICKLE1Q96MT3 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
PRICKLE1Q96MT3 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PRICKLE1Q96MT3 AL451085.2-201ENST00000605085 799 ntBASIC24.56■■□□□ 1.52
PRICKLE1Q96MT3 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PRICKLE1Q96MT3 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PRICKLE1Q96MT3 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
PRICKLE1Q96MT3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.55■■□□□ 1.52
PRICKLE1Q96MT3 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PRICKLE1Q96MT3 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
PRICKLE1Q96MT3 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC24.55■■□□□ 1.52
PRICKLE1Q96MT3 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PRICKLE1Q96MT3 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
PRICKLE1Q96MT3 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
PRICKLE1Q96MT3 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PRICKLE1Q96MT3 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC24.54■■□□□ 1.52
PRICKLE1Q96MT3 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PRICKLE1Q96MT3 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PRICKLE1Q96MT3 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
PRICKLE1Q96MT3 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
PRICKLE1Q96MT3 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PRICKLE1Q96MT3 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC24.53■■□□□ 1.52
PRICKLE1Q96MT3 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.53■■□□□ 1.52
PRICKLE1Q96MT3 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
PRICKLE1Q96MT3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.53■■□□□ 1.52
PRICKLE1Q96MT3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC24.53■■□□□ 1.52
PRICKLE1Q96MT3 AC103724.3-201ENST00000564481 992 ntBASIC24.53■■□□□ 1.52
PRICKLE1Q96MT3 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC24.52■■□□□ 1.52
PRICKLE1Q96MT3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC24.52■■□□□ 1.52
PRICKLE1Q96MT3 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
PRICKLE1Q96MT3 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC24.52■■□□□ 1.52
PRICKLE1Q96MT3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.52■■□□□ 1.52
PRICKLE1Q96MT3 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC24.52■■□□□ 1.52
PRICKLE1Q96MT3 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
PRICKLE1Q96MT3 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PRICKLE1Q96MT3 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PRICKLE1Q96MT3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PRICKLE1Q96MT3 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PRICKLE1Q96MT3 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PRICKLE1Q96MT3 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC24.51■■□□□ 1.51
PRICKLE1Q96MT3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
PRICKLE1Q96MT3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PRICKLE1Q96MT3 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
PRICKLE1Q96MT3 AC091060.1-201ENST00000623524 1766 ntBASIC24.51■■□□□ 1.51
PRICKLE1Q96MT3 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PRICKLE1Q96MT3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PRICKLE1Q96MT3 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PRICKLE1Q96MT3 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PRICKLE1Q96MT3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
PRICKLE1Q96MT3 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC24.5■■□□□ 1.51
PRICKLE1Q96MT3 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PRICKLE1Q96MT3 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PRICKLE1Q96MT3 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
PRICKLE1Q96MT3 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
PRICKLE1Q96MT3 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC24.49■■□□□ 1.51
PRICKLE1Q96MT3 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
PRICKLE1Q96MT3 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.48■■□□□ 1.51
PRICKLE1Q96MT3 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC24.48■■□□□ 1.51
PRICKLE1Q96MT3 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC24.48■■□□□ 1.51
PRICKLE1Q96MT3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
PRICKLE1Q96MT3 DUSP8P4-201ENST00000399538 1761 ntBASIC24.47■■□□□ 1.51
PRICKLE1Q96MT3 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PRICKLE1Q96MT3 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PRICKLE1Q96MT3 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PRICKLE1Q96MT3 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PRICKLE1Q96MT3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PRICKLE1Q96MT3 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PRICKLE1Q96MT3 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PRICKLE1Q96MT3 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PRICKLE1Q96MT3 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PRICKLE1Q96MT3 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC24.45■■□□□ 1.5
PRICKLE1Q96MT3 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PRICKLE1Q96MT3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC24.45■■□□□ 1.5
PRICKLE1Q96MT3 AL031848.2-201ENST00000607670 837 ntBASIC24.45■■□□□ 1.5
PRICKLE1Q96MT3 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC24.45■■□□□ 1.5
PRICKLE1Q96MT3 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PRICKLE1Q96MT3 AC097639.1-201ENST00000565519 1891 ntBASIC24.45■■□□□ 1.5
PRICKLE1Q96MT3 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PRICKLE1Q96MT3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC24.44■■□□□ 1.5
PRICKLE1Q96MT3 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PRICKLE1Q96MT3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms