Protein–RNA interactions for Protein: Q96FI4

NEIL1, Endonuclease 8-like 1, humanhuman

Predicted RBP Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1Q96FI4 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NEIL1Q96FI4 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
NEIL1Q96FI4 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
NEIL1Q96FI4 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.92■□□□□ 0.78
NEIL1Q96FI4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NEIL1Q96FI4 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NEIL1Q96FI4 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.91■□□□□ 0.78
NEIL1Q96FI4 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NEIL1Q96FI4 RARRES2P1-201ENST00000474487 481 ntBASIC19.91■□□□□ 0.78
NEIL1Q96FI4 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NEIL1Q96FI4 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NEIL1Q96FI4 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
NEIL1Q96FI4 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NEIL1Q96FI4 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.9■□□□□ 0.78
NEIL1Q96FI4 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NEIL1Q96FI4 YBX1P4-201ENST00000392794 808 ntBASIC19.9■□□□□ 0.78
NEIL1Q96FI4 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.9■□□□□ 0.78
NEIL1Q96FI4 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.9■□□□□ 0.78
NEIL1Q96FI4 AC019171.1-201ENST00000601251 1056 ntBASIC19.9■□□□□ 0.78
NEIL1Q96FI4 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NEIL1Q96FI4 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NEIL1Q96FI4 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NEIL1Q96FI4 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NEIL1Q96FI4 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NEIL1Q96FI4 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.89■□□□□ 0.77
NEIL1Q96FI4 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NEIL1Q96FI4 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NEIL1Q96FI4 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.89■□□□□ 0.77
NEIL1Q96FI4 LONRF2P2-201ENST00000439212 571 ntBASIC19.89■□□□□ 0.77
NEIL1Q96FI4 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NEIL1Q96FI4 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.89■□□□□ 0.77
NEIL1Q96FI4 PVT1_1.1-201ENST00000615125 194 ntBASIC19.89■□□□□ 0.77
NEIL1Q96FI4 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.89■□□□□ 0.77
NEIL1Q96FI4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NEIL1Q96FI4 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NEIL1Q96FI4 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.88■□□□□ 0.77
NEIL1Q96FI4 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NEIL1Q96FI4 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
NEIL1Q96FI4 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NEIL1Q96FI4 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NEIL1Q96FI4 KRT8P33-201ENST00000508125 1423 ntBASIC19.88■□□□□ 0.77
NEIL1Q96FI4 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.88■□□□□ 0.77
NEIL1Q96FI4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.88■□□□□ 0.77
NEIL1Q96FI4 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NEIL1Q96FI4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.88■□□□□ 0.77
NEIL1Q96FI4 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.88■□□□□ 0.77
NEIL1Q96FI4 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.88■□□□□ 0.77
NEIL1Q96FI4 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.87■□□□□ 0.77
NEIL1Q96FI4 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NEIL1Q96FI4 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
NEIL1Q96FI4 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.87■□□□□ 0.77
NEIL1Q96FI4 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.87■□□□□ 0.77
NEIL1Q96FI4 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
NEIL1Q96FI4 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.87■□□□□ 0.77
NEIL1Q96FI4 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NEIL1Q96FI4 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.87■□□□□ 0.77
NEIL1Q96FI4 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
NEIL1Q96FI4 MIR4508-201ENST00000584178 70 ntBASIC19.86■□□□□ 0.77
NEIL1Q96FI4 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.86■□□□□ 0.77
NEIL1Q96FI4 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
NEIL1Q96FI4 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NEIL1Q96FI4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
NEIL1Q96FI4 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NEIL1Q96FI4 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.85■□□□□ 0.77
NEIL1Q96FI4 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.85■□□□□ 0.77
NEIL1Q96FI4 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.85■□□□□ 0.77
NEIL1Q96FI4 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
NEIL1Q96FI4 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NEIL1Q96FI4 AC091060.1-201ENST00000623524 1766 ntBASIC19.85■□□□□ 0.77
NEIL1Q96FI4 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
NEIL1Q96FI4 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEIL1Q96FI4 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NEIL1Q96FI4 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEIL1Q96FI4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEIL1Q96FI4 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEIL1Q96FI4 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.84■□□□□ 0.77
NEIL1Q96FI4 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NEIL1Q96FI4 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.84■□□□□ 0.77
NEIL1Q96FI4 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
NEIL1Q96FI4 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.84■□□□□ 0.77
NEIL1Q96FI4 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
NEIL1Q96FI4 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
NEIL1Q96FI4 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.83■□□□□ 0.77
NEIL1Q96FI4 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NEIL1Q96FI4 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
NEIL1Q96FI4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.83■□□□□ 0.77
NEIL1Q96FI4 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
NEIL1Q96FI4 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NEIL1Q96FI4 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NEIL1Q96FI4 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NEIL1Q96FI4 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NEIL1Q96FI4 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.83■□□□□ 0.76
NEIL1Q96FI4 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NEIL1Q96FI4 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NEIL1Q96FI4 AC092803.2-201ENST00000564287 1899 ntBASIC19.82■□□□□ 0.76
NEIL1Q96FI4 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NEIL1Q96FI4 AC145676.1-201ENST00000514988 2004 ntBASIC19.82■□□□□ 0.76
NEIL1Q96FI4 AC103834.1-201ENST00000520383 144 ntBASIC19.82■□□□□ 0.76
NEIL1Q96FI4 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.82■□□□□ 0.76
NEIL1Q96FI4 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms