Protein–RNA interactions for Protein: Q96EY7

PTCD3, Pentatricopeptide repeat domain-containing protein 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3Q96EY7 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
PTCD3Q96EY7 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PTCD3Q96EY7 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PTCD3Q96EY7 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PTCD3Q96EY7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.52■■□□□ 1.36
PTCD3Q96EY7 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PTCD3Q96EY7 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PTCD3Q96EY7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.52■■□□□ 1.36
PTCD3Q96EY7 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
PTCD3Q96EY7 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PTCD3Q96EY7 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PTCD3Q96EY7 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PTCD3Q96EY7 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PTCD3Q96EY7 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PTCD3Q96EY7 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PTCD3Q96EY7 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
PTCD3Q96EY7 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PTCD3Q96EY7 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PTCD3Q96EY7 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PTCD3Q96EY7 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PTCD3Q96EY7 AL157400.5-201ENST00000507624 621 ntBASIC23.5■■□□□ 1.35
PTCD3Q96EY7 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PTCD3Q96EY7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.5■■□□□ 1.35
PTCD3Q96EY7 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
PTCD3Q96EY7 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PTCD3Q96EY7 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PTCD3Q96EY7 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PTCD3Q96EY7 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.49■■□□□ 1.35
PTCD3Q96EY7 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PTCD3Q96EY7 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.49■■□□□ 1.35
PTCD3Q96EY7 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PTCD3Q96EY7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
PTCD3Q96EY7 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
PTCD3Q96EY7 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PTCD3Q96EY7 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PTCD3Q96EY7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PTCD3Q96EY7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PTCD3Q96EY7 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.47■■□□□ 1.35
PTCD3Q96EY7 AC022413.1-201ENST00000624602 984 ntBASIC23.47■■□□□ 1.35
PTCD3Q96EY7 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PTCD3Q96EY7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PTCD3Q96EY7 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.47■■□□□ 1.35
PTCD3Q96EY7 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PTCD3Q96EY7 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PTCD3Q96EY7 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PTCD3Q96EY7 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.46■■□□□ 1.35
PTCD3Q96EY7 LINC01124-201ENST00000409786 2117 ntBASIC23.46■■□□□ 1.35
PTCD3Q96EY7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.46■■□□□ 1.35
PTCD3Q96EY7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.46■■□□□ 1.35
PTCD3Q96EY7 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PTCD3Q96EY7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.46■■□□□ 1.35
PTCD3Q96EY7 AC092296.2-201ENST00000589470 999 ntBASIC23.46■■□□□ 1.35
PTCD3Q96EY7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.45■■□□□ 1.35
PTCD3Q96EY7 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
PTCD3Q96EY7 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
PTCD3Q96EY7 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.45■■□□□ 1.34
PTCD3Q96EY7 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
PTCD3Q96EY7 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
PTCD3Q96EY7 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
PTCD3Q96EY7 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PTCD3Q96EY7 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
PTCD3Q96EY7 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.45■■□□□ 1.34
PTCD3Q96EY7 AC096887.2-201ENST00000623443 1957 ntBASIC23.45■■□□□ 1.34
PTCD3Q96EY7 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PTCD3Q96EY7 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.44■■□□□ 1.34
PTCD3Q96EY7 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
PTCD3Q96EY7 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.44■■□□□ 1.34
PTCD3Q96EY7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.44■■□□□ 1.34
PTCD3Q96EY7 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.44■■□□□ 1.34
PTCD3Q96EY7 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
PTCD3Q96EY7 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PTCD3Q96EY7 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PTCD3Q96EY7 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
PTCD3Q96EY7 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.43■■□□□ 1.34
PTCD3Q96EY7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.43■■□□□ 1.34
PTCD3Q96EY7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
PTCD3Q96EY7 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.43■■□□□ 1.34
PTCD3Q96EY7 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.43■■□□□ 1.34
PTCD3Q96EY7 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.43■■□□□ 1.34
PTCD3Q96EY7 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
PTCD3Q96EY7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.43■■□□□ 1.34
PTCD3Q96EY7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.43■■□□□ 1.34
PTCD3Q96EY7 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.43■■□□□ 1.34
PTCD3Q96EY7 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PTCD3Q96EY7 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.42■■□□□ 1.34
PTCD3Q96EY7 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.42■■□□□ 1.34
PTCD3Q96EY7 AC079834.2-201ENST00000609776 1949 ntBASIC23.42■■□□□ 1.34
PTCD3Q96EY7 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
PTCD3Q96EY7 AC025884.2-201ENST00000553429 711 ntBASIC23.42■■□□□ 1.34
PTCD3Q96EY7 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PTCD3Q96EY7 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
PTCD3Q96EY7 AC097639.1-201ENST00000565519 1891 ntBASIC23.41■■□□□ 1.34
PTCD3Q96EY7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.41■■□□□ 1.34
PTCD3Q96EY7 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PTCD3Q96EY7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PTCD3Q96EY7 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PTCD3Q96EY7 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
PTCD3Q96EY7 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.4■■□□□ 1.34
PTCD3Q96EY7 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PTCD3Q96EY7 ECEL1P2-201ENST00000461596 1295 ntBASIC23.4■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms