Protein–RNA interactions for Protein: Q96D70

R3HDM4, R3H domain-containing protein 4, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4Q96D70 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
R3HDM4Q96D70 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
R3HDM4Q96D70 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.47■□□□□ 0.71
R3HDM4Q96D70 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.47■□□□□ 0.71
R3HDM4Q96D70 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
R3HDM4Q96D70 AC138932.3-201ENST00000567634 1902 ntBASIC19.47■□□□□ 0.71
R3HDM4Q96D70 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
R3HDM4Q96D70 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
R3HDM4Q96D70 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
R3HDM4Q96D70 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
R3HDM4Q96D70 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
R3HDM4Q96D70 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.47■□□□□ 0.71
R3HDM4Q96D70 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
R3HDM4Q96D70 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
R3HDM4Q96D70 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.46■□□□□ 0.71
R3HDM4Q96D70 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
R3HDM4Q96D70 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.46■□□□□ 0.71
R3HDM4Q96D70 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
R3HDM4Q96D70 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
R3HDM4Q96D70 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
R3HDM4Q96D70 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
R3HDM4Q96D70 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
R3HDM4Q96D70 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
R3HDM4Q96D70 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
R3HDM4Q96D70 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
R3HDM4Q96D70 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
R3HDM4Q96D70 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
R3HDM4Q96D70 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
R3HDM4Q96D70 TSPY13P-201ENST00000338964 914 ntBASIC19.44■□□□□ 0.7
R3HDM4Q96D70 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
R3HDM4Q96D70 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
R3HDM4Q96D70 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
R3HDM4Q96D70 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.44■□□□□ 0.7
R3HDM4Q96D70 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.44■□□□□ 0.7
R3HDM4Q96D70 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
R3HDM4Q96D70 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
R3HDM4Q96D70 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
R3HDM4Q96D70 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
R3HDM4Q96D70 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
R3HDM4Q96D70 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
R3HDM4Q96D70 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
R3HDM4Q96D70 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
R3HDM4Q96D70 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.43■□□□□ 0.7
R3HDM4Q96D70 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
R3HDM4Q96D70 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.42■□□□□ 0.7
R3HDM4Q96D70 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3HDM4Q96D70 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
R3HDM4Q96D70 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3HDM4Q96D70 KRT18P60-201ENST00000312876 1297 ntBASIC19.42■□□□□ 0.7
R3HDM4Q96D70 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
R3HDM4Q96D70 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3HDM4Q96D70 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3HDM4Q96D70 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3HDM4Q96D70 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
R3HDM4Q96D70 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
R3HDM4Q96D70 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.41■□□□□ 0.7
R3HDM4Q96D70 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.41■□□□□ 0.7
R3HDM4Q96D70 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.41■□□□□ 0.7
R3HDM4Q96D70 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
R3HDM4Q96D70 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
R3HDM4Q96D70 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
R3HDM4Q96D70 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
R3HDM4Q96D70 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
R3HDM4Q96D70 AL139125.2-201ENST00000623134 1869 ntBASIC19.4■□□□□ 0.7
R3HDM4Q96D70 AC004987.1-201ENST00000428627 508 ntBASIC19.4■□□□□ 0.7
R3HDM4Q96D70 ATP5G2P3-201ENST00000429083 425 ntBASIC19.4■□□□□ 0.7
R3HDM4Q96D70 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.4■□□□□ 0.7
R3HDM4Q96D70 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
R3HDM4Q96D70 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
R3HDM4Q96D70 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.4■□□□□ 0.7
R3HDM4Q96D70 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
R3HDM4Q96D70 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
R3HDM4Q96D70 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
R3HDM4Q96D70 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
R3HDM4Q96D70 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
R3HDM4Q96D70 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
R3HDM4Q96D70 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
R3HDM4Q96D70 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.39■□□□□ 0.69
R3HDM4Q96D70 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.39■□□□□ 0.69
R3HDM4Q96D70 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.39■□□□□ 0.69
R3HDM4Q96D70 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.39■□□□□ 0.69
R3HDM4Q96D70 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
R3HDM4Q96D70 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
R3HDM4Q96D70 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.38■□□□□ 0.69
R3HDM4Q96D70 AC097639.1-201ENST00000565519 1891 ntBASIC19.37■□□□□ 0.69
R3HDM4Q96D70 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
R3HDM4Q96D70 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
R3HDM4Q96D70 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
R3HDM4Q96D70 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.37■□□□□ 0.69
R3HDM4Q96D70 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
R3HDM4Q96D70 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
R3HDM4Q96D70 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.37■□□□□ 0.69
R3HDM4Q96D70 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
R3HDM4Q96D70 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
R3HDM4Q96D70 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.37■□□□□ 0.69
R3HDM4Q96D70 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
R3HDM4Q96D70 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.36■□□□□ 0.69
R3HDM4Q96D70 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
R3HDM4Q96D70 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
R3HDM4Q96D70 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms